Pseudomonas syringae pv. tomato DC3000: PSPTO_2667
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Entry
PSPTO_2667 CDS
T00118
Name
(GenBank) spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_2667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_2667
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_2667
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AAO56169
UniProt:
Q882G1
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All DBs
Position
complement(2963495..2964520)
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AA seq
341 aa
AA seq
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MVLNKRATAVLAAGVLAFSSAAALAADSVNFVSWGGSTQDFQKEAWAAPFSKASGITVVQ
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNTIKRDEIDKRFVTDH
GAGSFFFSFVLGFNESKVGAKPPADWSAMFDTKTYPGKRALYKWPSPGVLELALLADGVA
ADKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEVSMGQMWNGRVYALQQDGAP
VGVSWKQNLVMADFLVVPKGAKNKDAAMKFIANATSAKGQADFSNLSAYAPVNTQSVARL
DSTLAPNLPTAHVADQITLDFAYWAKNGSDIATRWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaacaaacgtgcaacggcagtcctggcagcaggcgtgctggctttttccagc
gccgccgccttggctgccgacagcgtcaacttcgtcagttggggcggttcgacccaagac
tttcaaaaagaggcctgggcggcaccgttcagcaaggccagtggtatcacggtcgtgcag
gatggcccgaccgactacggcaaactcaaggccatggtcgaaagcggtaacgtgcagtgg
gacgtggtcgatgtcgaagccgactttgccttgcgtgccgccagtgaaggtctgctggag
ccgctggatttcaacaccatcaagcgcgacgaaatcgacaaacgtttcgtgaccgatcac
ggcgccggttcgttcttcttctccttcgtgctcggcttcaacgagagcaaggtaggcgcc
aagccgcctgcggactggtctgccatgttcgacaccaagacctaccccggcaaacgcgcc
ctgtacaaatggccaagccccggcgtgctggaactggccctgctggccgatggcgtagcc
gccgacaagctttacccgctggacctggatcgcgccttcaagaaactcgacaccatcaag
aaagacatcgtctggtggggcggcggtgcacagtcgcagcaactgctggcttccggcgaa
gtgtcgatgggccagatgtggaacggccgtgtctacgccttgcaacaggacggcgcaccg
gtgggcgtgagctggaaacagaacctggtcatggctgattttctggtcgtacccaaaggc
gcaaaaaacaaggacgcagcgatgaagttcatcgccaacgcgaccagcgccaaaggccag
gcggacttctccaacctgagtgcctacgcaccggtcaacacgcaaagtgtggcgcgtctg
gactccacgctggcgcctaacctgccgaccgcgcatgtcgccgaccagatcaccctcgac
ttcgcctactgggccaagaacggttccgacattgcgacacggtggaacgaatggctggtc
aagtaa
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