Pseudomonas syringae pv. tomato DC3000: PSPTO_2831
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Entry
PSPTO_2831 CDS
T00118
Symbol
syfC
Name
(GenBank) syringafactin efflux protein SyfC
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_2831 (syfC)
Transporters [BR:
pst02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PSPTO_2831 (syfC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
HlyD_D23
Biotin_lipoyl
Peptidase_M23
TPR_ELP1
DUF7532
Motif
Other DBs
NCBI-ProteinID:
AAO56330
UniProt:
Q881Q2
LinkDB
All DBs
Position
3180168..3181319
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AA seq
383 aa
AA seq
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MKRPGLRKAGWGGALLAVACAVFYAVEAPARAPVYITAQVERSDIENAVLATGVLEGIKQ
VDVGAQVSGQLKSLKVKLGDKVKKGQWLAEIDPLVLRNTLRQAEVDEEKLQADRHSAKAQ
MKQAERLYKRYKDLQTDQSVSRQDFENAESDYEMQQANVRALDAQIKSAQVQIDTAKVNL
GYTRIIAPIDGDVVGVVTQEGQTVIAQQLAPILLKLADLDTMTIKAQVSEADVIHIGAGQ
EVYFTILGEEKRYYAKLRGTEPAPQDYLETESSGGASRQNSAVFYNALFEVPNLDHRLRI
AMTAQVRIVLGTAKGALSVPVAALGPRNADGSYAVRVLDNKGFAEQRNVQTGINNNVQVE
ITGGLAEGERVVIGDPASVAAGA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcccggattgcgcaaggcaggttggggcggcgcgctgctggcggtggcctgt
gcggtgttttacgccgtcgaagcgccggccagagcaccggtctacatcaccgctcaggtt
gaacgaagcgacatcgaaaacgccgtgctggccaccggggtgctggagggcatcaaacaa
gtggacgtcggcgctcaggtgtctgggcagttgaagtcactcaaggtcaaactgggcgac
aaggtcaagaagggccagtggctggccgagatcgacccgctggtgctgcgcaacaccctg
cgccaggccgaggtggacgaggaaaaactgcaggccgaccggcattcggcgaaagctcag
atgaaacaggccgaacggctctacaaacgctacaaggatttacagaccgatcagtcggta
tcccggcaggactttgaaaatgccgaatccgactacgagatgcagcaggccaacgtgcgc
gcactggatgcccagataaagagcgcacaggtgcagatcgacacggcgaaggtcaacctg
ggctacacgcgaatcatcgcgccaatcgacggcgatgtggtcggtgtcgtgactcaggaa
ggccagaccgtcatcgcccaacaactggcgccgatcctgctgaaactggctgatctggac
accatgaccatcaaggctcaggtatcggaagccgacgtcattcacatcggcgctggccag
gaggtctatttcacgattctcggcgaggagaaacgctattacgccaaactgcgcggcacc
gagcccgcgccacaggattatctggaaaccgagagcagcgggggggcttcccggcagaac
tcggcggtgttctacaacgcgctgtttgaagtgcccaacctcgaccaccgcctgcgcatt
gccatgacggcccaggtgcgcatcgtgctgggcaccgccaaaggtgccttgagtgtgccg
gtggccgcactcgggccgcgtaacgccgacggttcttacgccgtacgggtgctggataac
aagggtttcgccgagcaacgaaacgttcagaccggcatcaacaacaacgttcaggtcgaa
ataaccggcgggcttgccgagggcgagcgggtggtaatcggtgatccggcatcggttgcg
gcgggggcctga
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