Pseudomonas syringae pv. tomato DC3000: PSPTO_2832
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Entry
PSPTO_2832 CDS
T00118
Symbol
syfD
Name
(GenBank) syringafactin efflux protein SyfD
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_2832 (syfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_2832 (syfD)
Transporters [BR:
pst02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
PSPTO_2832 (syfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
AAA_21
SMC_N
AAA_16
AAA_29
RsgA_GTPase
ABC2_membrane_3
AAA_22
MMR_HSR1
DUF4396
nSTAND1
AAA_23
AAA_28
AAA_25
TadZ_N
Ploopntkinase3
nSTAND3
IIGP
Motif
Other DBs
NCBI-ProteinID:
AAO56331
UniProt:
Q881Q1
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All DBs
Position
3181322..3183328
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AA seq
668 aa
AA seq
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MNQKVDIEALHETSINSDQPLLRLQQVSRSFMAGDREFQVLKHIDLAIHTGELVAIIGAS
GSGKSTLMNILGCLDHASAGSYQVNGQETRELDDDALAALRRDHFGFIFQRYHLLPHLDA
VRNVEIPAIYAGTAQTTRHERAQALLTRLGLGGHLQHRPSQMSGGQQQRVSIARALMNGG
QVILADEPTGALDTASGKEVMRTLLELHAAGHTVILVTHDPKVAANAERIIEVSDGEIIS
DRRTAQTTQPAPEAQPATPPGPAPRRLLASLGLFREAFNMAWIALISHRMRTLLTMLGII
IGITSVVSISAIGEGAKRYVLKDIQSIGSNTIDIYAGANFGDSRAKSIETLLPSDVAALN
QLYYIDSATPVVGRSMLVRYRNVDVDAQLNGVSSRYFQVRNIQLAAGITFSDQDARRQAQ
VVVLDHNTAQRLFGPGVNPLGQVILVGKLPCTVIGVTSDHKNLFIAGNTLNLWMPYETAA
GRVLGQRHLDSISVRVKDGMPSKAVEEQIKALMLQRHGTKDFFTNNLDSVMQTVQKTSRS
LTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVC
LMGGVIGIGLSYAIGYLFTLFVQQWEMVFSLASVVTAFACSTLIGVLFGFVPARNAARLD
PIEALARD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaggtagacatcgaagcgttgcacgaaacgtcgatcaacagcgaccaaccg
ctgctgcgcctgcaacaggtcagccgcagcttcatggcaggcgaccgcgaatttcaggtc
ctcaagcacatcgacctggccattcacaccggcgaactggtggcgatcatcggtgcatcg
ggctcgggcaaatcaaccctgatgaacattctcggttgcctggaccatgccagcgccggc
agctatcaggtcaacgggcaggaaacccgcgagctggatgacgatgcgctggcagcgctg
cgccgcgaccattttggcttcattttccagcgctaccatttgttgccgcacctggatgcg
gttcgcaatgtggagattccggccatttacgccggcaccgcgcagaccacgcgccatgag
cgtgctcaggcattgctcacgcgcctgggactgggcgggcatctgcagcatcggcccagc
cagatgtccggcggtcagcagcaacgcgtgagcatcgccagagcgttgatgaacggcggg
caggtgatactggccgatgagccgaccggcgcactggataccgccagcggcaaggaagtc
atgcgcacgctgctggaactgcatgccgcgggccatactgtgattctggtaacgcacgac
cccaaggtggctgccaacgccgagcggattatcgaagtcagcgacggcgaaatcatcagt
gaccgacgcacggcgcagacaacgcagcccgcgcccgaagcgcagccagccacgccgcca
ggtcccgcgcccaggcgtctgttggccagcctggggctgttccgtgaagcgttcaatatg
gcctggatcgcgctgatatcgcaccgcatgcgcaccttgctgaccatgcttggcatcatc
atcggtatcacctcggtggtctcgatctcagccattggcgaaggcgccaagcgctatgtg
ctcaaggacatccagtccatcggaagcaacaccatcgacatctatgccggcgccaacttt
ggtgacagccgggccaaatccatcgaaacgctgcttccctcagacgttgccgcgctcaat
cagctgtattacatcgacagcgccacccccgtggtcggtcgcagcatgctggtgcgctac
cgcaacgtcgatgtggacgcacagctcaatggcgtcagcagccgctattttcaggtgcgc
aacatccagctggcagccggcatcacgttcagtgatcaggatgcccggcgtcaggctcag
gtggtggtgctcgaccacaacaccgctcaacgcctgttcgggccgggcgtcaacccgctg
gggcaggtgattctggtcggcaaactgccgtgcacggtgatcggcgtcaccagcgaccat
aaaaacctgttcatcgccggtaacacgctcaacctgtggatgccttatgaaacggcggcg
gggcgggtgctggggcagcgacatctggacagcatcagcgtgcgggtcaaggacggcatg
ccgagcaaggcggtggaagagcagatcaaggcactgatgctgcagcgtcacggcaccaag
gacttcttcaccaacaacctcgacagcgtcatgcagacggtacagaaaaccagccgctcg
ctgaccctgttgttgtcgctgattgcggttatctccctggtggtgggcggaatcggggtg
atgaacatcatgctggtgtcggtgaccgagcgcactcgcgaaatcggcatccgcatggcc
gtcggcgcgcgtcagtcggacattcgccagcaatttctggtcgaggcggtcatggtctgc
ctgatgggcggggtaatcggtatcggcctgtcctacgccatcggctatctgtttaccttg
ttcgtccagcagtgggaaatggtcttttcactggcctcggtggtgaccgcattcgcctgt
tcgaccttgatcggcgtgctgttcggctttgtgcctgcacgcaatgccgcccgtctggac
cctatcgaagcgctggcgcgggactga
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integrated database retrieval system
