Pseudomonas syringae pv. tomato DC3000: PSPTO_3003
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Entry
PSPTO_3003 CDS
T00118
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter, periplasmic-D xylose binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_3003 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_3003 (xylF)
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
PSPTO_3003 (xylF)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Adhesin_P1_N
Peripla_BP_3
DUF4739
Motif
Other DBs
NCBI-ProteinID:
AAO56495
UniProt:
Q880Z3
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All DBs
Position
3376725..3377726
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AA seq
333 aa
AA seq
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MNTLKRTLLASALALLSLPVMADAAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVF
VQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAIAEAKKAGIKVVSYDRLILNA
DIDAYISFDNEKVGEMQASGVLQAAPKGNYFLLGGAPTDNNAKILREGQMKVLQPAIDKG
DIKIVGQQWVKEWNPTEALSIVENALTRNDNKIDGIVASNDATAGGAIQALAAQKLAGKV
PISGQDADLAAVKRVIDGTQTMTVYKPLKLIATEAARLSVQLVRNEKPAFTSQYDNGSKK
VDTILLTPTPLTKDNIDLLEKDGFYTKAQMGGQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgaaacgcacgctgcttgccagtgccttggcactgctgtccctgccggtc
atggccgacgccgcccacccgaaaatcggcttttccatcgacgacctgcgcctggagcgc
tggtcacgagaccgtgattacttcgtggcggcggcagaaaaactggatgccaaggtcttc
gtacagtccgccgatgccaacgagcagaagcagatttcgcagattgaaaacctcatctct
cgcggcgtcgacgtgattgtcatcgtgccgttcaacgccaccgtgctgaccaacgccatc
gccgaagccaagaaggccgggatcaaggtcgtttcgtatgaccgtctgatcctcaatgcc
gacatcgacgcttacatttccttcgataacgaaaaggtcggcgagatgcaggccagcggc
gtgctgcaagcggcacccaagggcaattactttttgctcggcggcgcgcccaccgacaat
aacgccaaaattctgcgcgaaggccagatgaaagtgctgcaaccggccatcgacaagggc
gatatcaagattgtcgggcaacagtgggtcaaggagtggaaccccaccgaagcactgagc
attgtggagaacgccctgacccgcaatgacaacaagatcgatggcatcgtcgcctccaac
gacgcgacggccgggggcgccattcaggcgctggccgcgcagaaactggccggcaaggtg
ccgatttcgggtcaggacgccgacctggcggcggtcaagcgggtcatcgatggcacccag
accatgaccgtttacaagccgctgaaactgatcgccaccgaagccgccagactgtcggtg
caactggtacgtaacgagaaacctgcctttacctcgcagtacgacaatggcagcaagaaa
gtcgacactatcttgctgaccccgacaccgttgaccaaagacaacatcgacctgctggag
aaagacgggttctacaccaaggcgcagatgggcggccagtga
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