Pseudomonas syringae pv. tomato DC3000: PSPTO_3046
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Entry
PSPTO_3046 CDS
T00118
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_3046
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSPTO_3046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
HTH_50
AAA_2
AAA
Mg_chelatase
PAS_8
MCM
PAS_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAO56535
UniProt:
Q880V5
LinkDB
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Position
complement(3425886..3427889)
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AA seq
667 aa
AA seq
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MTPQPMAFSVQDLDYLTALDPTSLSEGPIAALENAWLACLSGCTEQPVGVRQVIWDSWHR
SVSAGLDPKDGEYRFVTPADLEATLAANRVLIAAAAEVMRGLLAYNPRGHINLTDAAGTT
LYFCGLDLTPVGSRLLESVQGTNCTGLALAEDRLLYVLAEENFGNDLRRRRMHCAAAPIR
DAQGRTLAMLTLTAEPGWFHFHTLGTVQAAAEAVSRHMALQALLEEQQTVLEVLNEGLVV
LDERGCIKALNRYARQLFRVGRDLLGSPFQRLGRSELTDEILLRGGDGLRDLDCTFELHD
RSHLACLVSVCSLGQGGRIVSLRENRRIREITRRIVGSQASYTFDTIQGSSRAIQDALHL
GRIASRSDSTTLILGESGTGKELFAQAIHNASERCNGPFVAVNCGAIPRDLVQSELFGHV
EGAFTGSARGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGAKQSRQV
NVRIIAATHRNLSQAVVDGAFREDLYYRLNVLNLTVPPLRMRREDVPLLAQHFLDRCARS
LRKSVQGISPEALDILCAYHWPGNVRELENIIERATNLALTERLQTTDLPLEIKQRLRPL
VPGRMPELQAAPDLGTHEMNAIITALKATHGNIRLAAKQLNVSRGGLYNKMNRFGLSADE
FRSGPEC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcagccaatggctttcagcgtacaagaccttgattacctcactgcgctagac
ccgacctcgctgagcgaagggccgattgcggcgctggagaacgcctggctggcttgcctg
agcggatgcaccgaacaacctgttggggtgcgacaggtgatttgggactcctggcaccgc
agcgtcagtgcagggctggaccctaaagacggggaataccgctttgttactcccgctgat
ctggaggcaaccctggcagccaatcgagtgttgattgctgcagcggcagaggtcatgcgt
ggcttactggcgtacaaccccaggggccatatcaatctgaccgatgccgcaggcacaacg
ttgtatttttgtgggctcgacctcacgcctgttggcagtcgcttgctggagtccgtccaa
ggcaccaactgcaccggcctggcgttggccgaagacagattgttgtatgtgctagccgag
gaaaacttcggcaacgacctgcgtcggcggcgcatgcattgcgctgcagcaccgatccgc
gatgcccaaggccggacgctggccatgttgaccctgaccgccgaacccggctggtttcat
ttccatacgttgggcactgtgcaggctgctgccgaagcggtttcgcggcatatggcgttg
caggcgttgctggaagagcagcaaaccgtgcttgaagtgctcaacgaagggctggtggtg
ctggatgagcgcggctgtatcaaggctctcaatcgttatgcccgacaattgtttcgcgtg
ggccgcgacttgttgggcagcccgttccagcgtctgggccggagcgaactgaccgatgag
attctgctgcgcggcggggacggcctgcgggacctggattgcacgtttgagctgcatgac
cgcagtcacctggcatgcctggtctcggtgtgttcactggggcagggcgggcgcattgtt
tcgctgcgcgagaaccgccgtatacgggaaattacccggcggatcgtcggctcccaggcc
agctacacctttgacaccattcagggcagctcccgcgctattcaggatgcgttgcacctg
gggcgcatagccagtcgcagtgattcaaccacattgattctgggcgaaagcggcaccggc
aaggagttattcgcccaagccatccataacgccagtgaacgttgcaacgggccattcgta
gccgtcaactgcggggccattccgcgagatctggtgcagagtgaattgtttggtcatgtc
gaaggcgcgttcaccggatcggcgcgtggcggctcggccggcaagtttgaattggccgat
ggcggtacgatctttctcgacgaaatcggtgacatgtcttttgatgcccaggtcagcctt
ttgcgcgtcttgcaagaaggcgaagtgacacgagtgggggcaaagcaatcccggcaagtg
aatgtccgcatcatcgcggcgacccaccgtaacctaagccaggcggtggtggatggcgcg
tttcgtgaggacctttactaccggctcaatgtactgaatttgacggttccaccgctgaga
atgcgccgcgaagatgtgccgctactggcacagcattttctcgatcgttgcgcacgttcg
ctgcgtaagtcggtgcagggtatatcgccggaggcgctggatattctgtgtgcctaccac
tggcccggcaatgttcgagaactggaaaatatcatcgagcgggcgaccaacctggccctg
accgagcggctccagaccacagatctgccgctcgaaatcaagcaaaggctgcggcctttg
gtgccagggcgcatgcctgaactccaggctgcaccagacctcggaacgcatgaaatgaac
gcaatcatcaccgcactcaaggcgacccacggtaatatccggctggccgccaaacagctg
aacgtgtcccggggcgggctgtataacaagatgaatcggtttgggttaagtgctgatgag
tttcgctcgggaccagagtgttga
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