Pseudomonas syringae pv. tomato DC3000: PSPTO_3087
Help
Entry
PSPTO_3087 CDS
T00118
Symbol
hopAB2
Name
(GenBank) type III effector HopAB2
KO
K13452
effector protein HopAB [EC:6.3.2.-]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
PSPTO_3087 (hopAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AvrPtoB-E3_ubiq
AvrPtoB_bdg
Motif
Other DBs
NCBI-ProteinID:
AAO56576
UniProt:
Q8RSY1
Structure
PDB
LinkDB
All DBs
Position
complement(3468470..3470131)
Genome browser
AA seq
553 aa
AA seq
DB search
MAGINRAGPSGAYFVGHTDPEPVSGQAHGSGSGASSSNSPQVQPRPSNTPPSNAPAPPPT
GRERLSRSTALSRQTREWLEQGMPTAEDASVRRRPQVTADAATPRAEARRTPEATADASA
PRRGAVAHANSIVQQLVSEGADISHTRNMLRNAMNGDAVAFSRVEQNIFRQHFPNMPMHG
ISRDSELAIELRGALRRAVHQQAASAPVRSPTPTPASPAASSSGSSQRSLFGRFARLMAP
NQGRSSNTAASQTPVDRSPPRVNQRPIRVDRAAMRNRGNDEADAALRGLVQQGVNLEHLR
TALERHVMQRLPIPLDIGSALQNVGINPSIDLGESLVQHPLLNLNVALNRMLGLRPSAER
APRPAVPVAPATASRRPDGTRATRLRVMPEREDYENNVAYGVRLLNLNPGVGVRQAVAAF
VTDRAERPAVVANIRAALDPIASQFSQLRTISKADAESEELGFKDAADHHTDDVTHCLFG
GELSLSNPDQQVIGLAGNPTDTSQPYSQEGNKDLAFMDMKKLAQFLAGKPEHPMTRETLN
AENIAKYAFRIVP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtatcaatagagcgggaccatcgggcgcttattttgttggccacacagacccc
gagccagtatcggggcaagcacacggatccggcagcggcgccagctcctcgaacagtccg
caggttcagccgcgaccctcgaatactcccccgtcgaacgcgcccgcaccgccgccaacc
ggacgtgagaggctttcacgatccacggcgctgtcgcgccaaaccagggagtggctggag
cagggtatgcctacagcggaggatgccagcgtgcgtcgtaggccacaggtgactgccgat
gccgcaacgccgcgtgcagaggcaagacgcacgccggaggcaactgccgatgccagcgca
ccgcgtagaggggcggttgcacacgccaacagtatcgttcagcaattggtcagtgagggc
gctgatatttcgcatactcgtaacatgctccgcaatgcaatgaatggcgacgcagtcgct
ttttctcgagtagaacagaacatatttcgccagcatttcccgaacatgcccatgcatgga
atcagccgagattcggaactcgctatcgagctccgtggggcgcttcgtcgagcggttcac
caacaggcggcgtcagcgccagtgaggtcgcccacgccaacaccggccagccctgcggca
tcatcatcgggcagcagtcagcgttctttatttggacggtttgcccgtttgatggcgcca
aaccagggacggtcgtcgaacactgccgcctctcagacgccggtcgacaggagcccgcca
cgcgtcaaccaaagacccatacgcgtcgacagggctgcgatgcgtaatcgtggcaatgac
gaggcggacgccgcgctgcgggggttagtacaacagggggtcaatttagagcacctgcgc
acggcccttgaaagacatgtaatgcagcgcctccctatccccctcgatataggcagcgcg
ttgcagaatgtgggaattaacccaagtatcgacttgggggaaagccttgtgcaacatccc
ctgctgaatttgaatgtagcgttgaatcgcatgctggggctgcgtcccagcgctgaaaga
gcgcctcgtccagccgtccccgtggctcccgcgaccgcctccaggcgaccggatggtacg
cgtgcaacacgattgcgggtgatgccggagcgggaggattacgaaaataatgtggcttat
ggagtgcgcttgcttaacctgaacccgggggtgggggtaaggcaggctgttgcggccttt
gtaaccgaccgggctgagcggccagcagtggtggctaatatccgggcagccctggaccct
atcgcgtcacaattcagtcagctgcgcacaatttcgaaggccgatgctgaatctgaagag
ctgggttttaaggatgcggcagatcatcacacggatgacgtgacgcactgtctttttggc
ggagaattgtcgctgagtaatccggatcagcaggtgatcggtttggcgggtaatccgacg
gacacgtcgcagccttacagccaagagggaaataaggacctggcgttcatggatatgaaa
aaacttgcccaattcctcgcaggcaagcctgagcatccgatgaccagagaaacgcttaac
gccgaaaatatcgccaagtatgcttttagaatagtcccctga
DBGET
integrated database retrieval system
