Pseudomonas syringae pv. tomato DC3000: PSPTO_3130
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Entry
PSPTO_3130 CDS
T00118
Symbol
glgX
Name
(GenBank) glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00500
Starch and sucrose metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSPTO_3130 (glgX)
Enzymes [BR:
pst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PSPTO_3130 (glgX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AAO56617
UniProt:
Q880M4
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All DBs
Position
3519308..3521491
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AA seq
727 aa
AA seq
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MNTKSTPAADESSASHDSSASTPTRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSTGEVELERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHADGDLSFDERDSAPFVPKSKVIDEAYTWGRDQRVGTPWD
KTIFYETHVRGITMRHPEVAEELRGTFAGLGSAPVVDHIRKLGVTSVELLPIHAFVNDQH
LLQKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLVAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDEGQLADFAARMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNVSWNHGVEGPTEDPEINTLRLRQMRNFFATLLLAQG
TPMIVAGDEFARTQHGNNNAYCQDSEIGWINWDLDEDGEALLKFVTRVIKLRQSYPILRR
SRFLVGDYNEEIGVKDVTWLAPSGEEMSVEQWHDANGRCLGMLMDGRAQETGIRRPGADA
TLLLVVNSHHDGVNFTLPQVPEGTHYECLIDTNQDDARSKEQFAFGSHYTVTPRSLLLFE
VKREDQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtcaactccagcggcagatgaaagctccgcttcgcacgacagttctgcc
agcaccccgacgcgcattcgtgaagggcttcccttccctctcggtgccagctgggatggt
ctgggtgtaaacttcgccctgttctcggccaacgccaccaaagtcgaactctgcctgttc
gattcgaccggtgaagtagagctggagcgtatcgagcttccggaatacaccgacgagatc
taccacggctatctgcccgacgctcaccctgggctgatttacggctaccgtgtttatggt
ccttacgatccgaagaacggccatcgcttcaaccacaacaaattgctgatcgacccgtac
gccaagcagttggtcggtgagctcaaatggtcggaagcgttgttcggctacaccatcggc
catgctgacggcgacctgagcttcgacgagcgcgacagcgcgccgttcgtgccaaaaagc
aaggtgattgacgaggcctacacttggggccgcgatcagcgcgtcggtacgccgtgggac
aagaccattttctatgagacccacgtgcgcggcatcaccatgcgccaccctgaggtcgcg
gaagagttacgcggtacgtttgcaggcctgggatcagcgcccgtcgtcgatcacatccgc
aagctgggcgtgacgtctgtcgagctgctgccgatccatgcgttcgtcaacgatcagcat
ttgttgcaaaaaggcatgaccaactactggggctataacagcatcgcgttcttcgccccg
gacccgcgctacctggccagcggcaagatcgccgagttcaaggaaatggtcgcacacctg
caccatgcaggcctggaggtcattctcgacgtggtctacaaccacaccgccgaaggcaac
gagctgggtccgaccctgtcgatgcgcggtatcgacaacgcctcatattaccggctgatg
ccggacgacaaacgctattacatcaacgattccggtaccggcaacaccctcgacctgagc
cacccttgcgtattgcagatggtcaccgactcgctgcgttattgggcgtcggaaatgcac
gtcgacggcttccgtttcgacctggcaaccattctcggtcgttaccacgatggtttcgat
gagcgtcacagcttcctggttgcgtgccgtcaggacccggtcctgcgtcaggtcaaactg
gtcgccgagccttgggattgcggcccgggtggctatcaagtgggcggcttcccgccgggc
tggatggaatggaacgacaagttccgtgacaccgtgcgggccttctggaaaggcgacgaa
ggccaactggccgacttcgctgcacgcatgaccgcttcgggcaacatgttcaaccagcgc
ggtcgccgccctcaggcgtcggtgaacttcatcactgcgcacgatggcttcacgctgcac
gacctggtgtcgtacaacgacaagcacaacgaggccaacgacgaaaacaaccaggacggc
agcaataacaacgtgtcctggaaccacggcgtcgaaggtccgaccgaagacccggaaatc
aacaccctgcgtctgcgccagatgcgtaacttcttcgccacattgctgctggctcaaggc
acgccgatgatcgttgccggtgatgaattcgcgcgcactcagcacggcaacaacaatgcc
tattgccaggacagtgaaattggctggatcaactgggacctggacgaagacggcgaagcg
ctgctcaagttcgtcacccgtgtgatcaagttgcgtcagagctaccctatcctgcgtcgt
agccgctttttggtcggcgactacaacgaagaaatcggcgtcaaggacgtaacctggctt
gcgccaagtggcgaagaaatgagtgtcgagcagtggcacgatgccaacggccgctgcctg
ggcatgctgatggatggccgcgcgcaggaaaccggcattcgtcgtccgggtgccgacgcc
acgctgctgttggtggtcaactcgcaccatgacggcgtcaacttcaccttgccgcaagta
ccggaaggcacccattacgagtgcctgatcgacactaatcaggacgatgcacgcagcaag
gagcagtttgcgttcggttcgcattacaccgtcaccccacgttcgctgctgctgtttgaa
gtcaagcgtgaagatcagcaatga
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