Pseudomonas syringae pv. tomato DC3000: PSPTO_3156
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Entry
PSPTO_3156 CDS
T00118
Name
(GenBank) transcriptional regulator, AsnC family
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_3156
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PSPTO_3156
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
HTH_11
MarR_2
MarR
NirdL-like_HTH
HTH_IclR
Sigma70_r4
Sigma70_r4_2
HTH_Crp_2
HTH_5
HTH_27
DUF7343
HTH_23
LexA_DNA_bind
TrmB
HTH_1
HTH_39
Rrf2
HTH_31
DUF7342
DnaD_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AAO56642
UniProt:
Q880K0
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Position
3548894..3549361
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AA seq
155 aa
AA seq
DB search
MQLKLSPIDRRILRLLQHDASLSAAEIAERVELSQSPCWRRIHRLQEDGVIERTVALLST
QKLGLSMTVFVEVKLSGHGRRYLAEFEEAIIGHPEVLECYTMAGGMDFMLKVVAQDIASY
ERFLRDHLLQLPHVHEAHSNIAMSTVKRTTELPLD
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaattgagccccatcgatcgcaggattcttcgcctgctgcaacatgacgcc
agcctctcggcggcagaaatcgcggaacgtgtagagctgtcgcaatcaccctgctggagg
cgtattcatcggctgcaggaggacggcgtgatcgagcgcacggtcgccctgctcagcacg
caaaaactcggcctgagcatgaccgtcttcgtcgaggtcaagctgtcggggcatggccgg
cgttatctggccgaattcgaagaggcgatcatcggccaccccgaggtgctggagtgctac
acaatggcgggcgggatggacttcatgctcaaggtggtggctcaggacatcgccagctat
gagcgctttctgcgcgaccacctgctgcaattgccccacgtgcacgaggcgcattcgaat
atcgccatgagcacggtgaaacgcaccacagagctgccgctggattag
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