Pseudomonas syringae pv. tomato DC3000: PSPTO_3330
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Entry
PSPTO_3330 CDS
T00118
Symbol
tliD
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSPTO_3330 (tliD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_3330 (tliD)
02044 Secretion system [BR:
pst02044
]
PSPTO_3330 (tliD)
Transporters [BR:
pst02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSPTO_3330 (tliD)
Secretion system [BR:
pst02044
]
Type I secretion system
Multiple protein transporter
PSPTO_3330 (tliD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
nSTAND1
AAA_33
AAA_30
DUF87
AAA_29
nSTAND3
DUF1270
SbcC_Walker_B
RsgA_GTPase
STAS
NACHT
DUF5480
Motif
Other DBs
NCBI-ProteinID:
AAO56808
UniProt:
Q87ZU4
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All DBs
Position
complement(3766614..3768413)
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AA seq
599 aa
AA seq
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MSALPHSAQPPLYKALADYKSALIGVGCFTALINVLMLAPSIYMLQVYDRVLTSQNQTTL
AMLTLMVVGFFAFIGVLEMIRSFVVIRIGSELERRFNLRVYQAAFESNLHAGQRQAGQAL
GDLSFIRQFLTGPALFAFFDAPWFPVYLAVIFLFDPWLGVLASVGTVLLVGLACLNEWLT
RKPLAEASGYSQQSSQLATRHLQQAEAIQAMGMLEALRRRWFNVHGRFLALQNRASDTGA
VISSISKALRLCLQSLVLGLGALLVIRGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWS
SARLAYGRLDHLLKTYAEPAPRMALPTPRGQISAEQVSAAPPGRNSPTVQQVSFQLQAGE
VLGVLGASGSGKSTLARVLVGVWPALGGTVRLDGADMHRLDREALGPHIGYLPQDIELFG
GSVAENIARFREGDASAVVAAAQLAGVHELILRLPQGYDTRLGDDGGGLSGGQKQRVALA
RALYGDPKLVVLDEPNSNLDAAGEAALTQAMGELKARGCTVVLVTHRTQSLSQTDCLLVL
SEGRMQAFGPTAQVLQALSGQASSGQASTTQAAQPQPRSVPAGLSMSRQYGNQNRQSDV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgttgccccatagcgcccagccaccgctctacaaagcgctggcagactacaag
agcgcgttgatcggtgtgggttgttttaccgcgctgatcaacgtgttgatgctcgctcca
tcgatttacatgttgcaggtctatgaccgcgtattgacctcacagaaccagaccacactg
gccatgctgaccctgatggtggtcgggttcttcgcctttatcggcgtgctggagatgatt
cgcagctttgtggtgatccgcatcggcagcgagctggagcgacgtttcaatttgcgcgtt
tatcaagccgcgttcgagagcaacctgcatgccgggcagcgccaggccggacaggcgctg
ggcgacctgtccttcatccggcagtttctcaccggccctgcgttgttcgcgttcttcgac
gccccctggtttcccgtctacctggcggtcatttttcttttcgacccctggcttggcgtg
ctggccagtgttggtacggtgttgctggtagggctggcctgtctgaatgagtggctgacc
cgcaaaccgctggccgaggccagtggctattcgcagcagtcgtcgcaactggcgacccgt
catctgcagcaggccgaggccattcaggcgatgggcatgctcgaagcgttgcgtcgtcgc
tggttcaatgtgcacgggcgctttctggccctgcagaaccgcgccagcgacaccggagcg
gtgatcagttcgatcagcaaggcgctgcgcctgtgcctgcaatcactggtgttggggctg
ggagcgttgctggtgattcgtggcgacatgaccgcaggcatgatgatcgccggctcgatc
ctgatggggcgggtactcagccctatcgatcaactgattgcagtctggaaacaatggagt
tctgcacgtctggcttatgggcgtctggaccatttgctcaagacctacgccgagcccgcg
ccgcgcatggcgctgcccacgccgcgtggtcagatcagtgcggagcaggtcagcgctgcg
cctccgggccgaaactcgcctacggttcagcaggtgagcttccagttgcaggcaggggag
gtgctcggcgtgctgggcgcatcgggttccggcaaatcgaccctggcccgggtgctggtc
ggggtatggcccgcactgggcggaacggtgcggctggacggtgccgacatgcaccggctg
gaccgggaggcgctgggcccccatattggctatttgccgcaagacatcgaattgtttggc
ggcagcgtggcagaaaacatcgcgcgctttcgcgagggcgacgcgagcgcggtggtggcg
gctgcgcaactggcgggtgtgcatgaactgatcctgcgcctgccgcaaggttatgacacg
cgactgggcgatgatggcggcggtttgtccggcggtcagaaacagcgcgttgcgttggcc
cgcgccttgtacggcgaccccaaactggtggtgctcgatgagcccaactccaatctggac
gccgccggcgaagcggccctgacccaggcaatgggtgaactcaaggcgcgtggatgcacc
gttgtgctcgtcactcaccgcacccagtccttgagtcagaccgattgcctgctggtgctg
agcgaaggtcgcatgcaggcattcggccctacggctcaggtgctgcaagccttgtccggc
caggcatcttccgggcaagcgtccaccacgcaagcagcacaaccgcaaccccgctcggta
cctgccgggctctccatgagccgtcagtacggcaaccagaacaggcagtccgacgtatga
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