Pseudomonas syringae pv. tomato DC3000: PSPTO_3353
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Entry
PSPTO_3353 CDS
T00118
Symbol
clpA
Name
(GenBank) ATP-dependent clp protease, ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pst03110
]
PSPTO_3353 (clpA)
Chaperones and folding catalysts [BR:
pst03110
]
Heat shock proteins
HSP100
PSPTO_3353 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
RuvB_N
AAA_14
TniB
AAA_18
AAA_7
Mg_chelatase
TsaE
nSTAND3
AAA_3
AAA_6
RNA_helicase
ATPase_2
NACHT
IstB_IS21
Zeta_toxin
AAA_33
TIP49
bpMoxR
Rad17
AAA_28
Torsin
IPT
AAA_17
CobT_C
DUF815
SKI
Motif
Other DBs
NCBI-ProteinID:
AAO56831
UniProt:
Q87ZS1
LinkDB
All DBs
Position
complement(3789289..3791562)
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AA seq
757 aa
AA seq
DB search
MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE
FIDSTTPLIPVHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA
VFLLKQQSVARIDVVNYIAHGISKVPGHGEHSSEGEQDMQDDEGGEASSSGNPLDAYASN
LNELARQGRIDPLVGRESEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQ
VPDLLANSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPQAILFIDEIHTIIGAGA
ASGGVMDASNLLKPMLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTI
GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVE
KRVKRIDVPQVEDIVAKIARIPPKHVNSSDKELLRNLERDLKLTVFGQDAAIDSLSTAIK
LSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELIRFDMSEYMERHTVSRLIG
APPGYVGFDQGGLLTEAITRQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNTGRKAD
FRNVIVIMTTNAGAESAARASIGFTHQDHSSDAMEVIKKSFTPEFRNRLDTIIQFGRLSH
EVIKSVVDKFLTELQAQLEDKRVLLEVSEAARSWLAQGGYDAAMGARPMARLIQDKIKRP
LAEEILFGELSEHGGVVHIDIRDGEITFDFETTAEMA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtgagctcgaagtcaccctcaatcttgccttcaaggaggcacgttcgaag
cgtcatgagttcatgacggtcgagcatctcctgctggctctattggataatgaggctgca
gccactgtcctgcgtgcctgcggcgcaaacctcgataaactcaagcatgatctgcaggag
ttcatcgactccaccacgccgctgatccccgtccacgacgaggaccgcgagactcaaccg
acgctgggttttcagcgcgttctgcaacgcgctgtcttccacgtgcaaagctctggcaag
cgcgaagtgactggcgccaacgtgctggtcgcaattttcagtgagcaggaaagccaggcc
gtatttctgctcaagcagcagagtgtggcccggattgatgtcgtcaactacattgcccac
ggtatctccaaggttccagggcatggcgaacactcttctgaaggtgagcaagatatgcag
gacgacgagggcggtgaagcatcttcctcaggcaatcctctggatgcctatgccagcaat
ctgaacgaattggcgcgtcaggggcgcatcgatccactggtcggccgcgaaagcgaagtc
gagcgtgtggcgcagattctcgctcgtcggcgcaagaacaacccgctgctggtcggagag
gccggggtgggtaaaaccgccattgccgagggtcttgccaagcgtatcgtcgacaatcag
gtgcctgacctgcttgccaacagcgttgtctattcgcttgacctgggtgccttgctggcg
gggaccaaataccgtggtgatttcgagaagcgcttcaaggcgctgctcaatgagctgcgt
aagcgtccgcaggcgatcctgttcatcgacgagatccacacgatcattggtgccggtgcg
gcgtccggcggggtgatggatgcctcgaacctgctcaagccgatgctgtcttccggcgag
attcgctgcatcggttcaacgacgttccaggagtttcgcgggattttcgagaaggaccgt
gccttggcacgtcgcttccagaaagtcgacgtgtccgagccttcggtcgaagacactatc
ggaatcctgcgcggcctgaaaagccgtttcgagcagcatcacagcatcgaatacagcgat
gaagccttgcgcgccgccgctgagctcgcctcgcgctacatcaatgaccgtcatatgccc
gacaaggccatcgacgtgattgacgaagcgggtgcctatcagcgtctgcagccggtcgaa
aaacgcgtcaagcgcatcgatgttccgcaggttgaagacattgtcgccaagatcgcccgt
attccgccgaaacacgtcaacagttccgacaaggagctgctgcgtaacctggagcgcgat
ctcaagctgacggtgtttggtcaggatgcggcgatcgattcgctgtctacggccatcaag
ctgtcgcgcgcagggctcaagtcgccggacaagccggtcggttccttcctgttcgccggg
cctaccggtgtcggcaagaccgaagctgctcgtcagctggcaaaagccttgggtgtcgag
ctgattcgttttgacatgtccgagtacatggagcgtcacaccgtttctcgcttgatcggt
gcgcctccaggctacgtcggtttcgatcagggcggtctgctgacggaagccattacccgg
cagccgcattgcgtgctgctgctcgatgaaatcgagaaagcgcatccggaagtcttcaac
ctgctgttgcaggtgatggaccacggtacgctcaccgataacaccgggcgcaaggcggac
ttccgcaacgtgatcgtgatcatgaccactaacgccggtgctgaatccgcggcgcgggct
tctatcggtttcacgcatcaggaccactcgtctgatgccatggaagtgatcaagaagagc
ttcacgccggagttccgcaaccgtctggacacgatcattcagtttggtcgtctcagtcac
gaagtcatcaagagcgtggtggacaagttccttaccgagcttcaggctcaactggaagac
aagcgcgtactgctcgaagtctccgaggcggcaagaagctggctggcgcagggcggttac
gatgcagcgatgggcgcacgcccgatggctcgcctgattcaggacaagatcaaacggccg
ttggctgaagagatcctgtttggcgagttgtcagagcatggcggcgtcgtgcacatcgac
attcgtgatggcgagatcacgttcgatttcgaaaccacggcagaaatggcctga
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