Pseudomonas syringae pv. tomato DC3000: PSPTO_3358
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Entry
PSPTO_3358 CDS
T00118
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PSPTO_3358 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pst03016
]
PSPTO_3358 (trmU)
Enzymes [BR:
pst01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PSPTO_3358 (trmU)
Transfer RNA biogenesis [BR:
pst03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PSPTO_3358 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
ATP_bind_3
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AAO56836
UniProt:
Q87ZR6
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All DBs
Position
3795943..3797073
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AA seq
376 aa
AA seq
DB search
MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYCTARED
LADAQAVCDRIGIKLHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNREIKFKAFLDY
ALMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEK
PQVRAIAEKHGLATAKKKDSTGICFIGERRFTDFLRQYLPAQPGDIKTTEGEVIGRHSGL
MYHTIGQRQGLGIGGLKDASDDPWYVLVKDLDNNELIVGQGNDHPWLFSRALVSSEIYWV
NPIDLSSPRKLTAKVRYRQSDQPCTLEKTAGGYRATFDDPQRAVTPGQSVVFYDGEICLG
GGVIEIAEPWTSKDKR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatccagccccctcgaactcagaaatgaagcgcgtcatagtcggcatgtccggc
ggcgtggactcttccgtttccgccgtactgctcatggagcagggttatcaggtggaaggc
ttgttcatgaagaactgggaagaagacgacggaacggaatattgcaccgcccgcgaagac
ctggcagacgcccaggctgtgtgcgacaggatcggtatcaagctgcacacggccaacttc
gccgccgagtactgggacaacgtcttcgagcacttcctcgaagagtacaaggccggacgc
acgccaaacccggacatcctctgcaaccgggaaatcaagttcaaagcctttctggactat
gccttgatgctgggcgccgatctgattgcaaccggccactatgtgcgccgtcgcgatatc
gacgggcgtaccgagctgctcaagggcctggatccgaacaaggaccagagctacttcctg
catgccgtcggtggcgaacaaatcgcccggacgctgttcccggtaggcgagctggaaaaa
ccgcaagtgcgcgccattgccgagaaacacggcctggcgacggccaagaagaaggattcc
accggcatctgcttcattggcgagcgccgcttcaccgattttctgcgccaatacctgccc
gcccaacccggcgacatcaagaccaccgaaggcgaagtcatcggtcgccacagtggcctg
atgtaccacaccatcggtcagcgccagggcctgggcattggcggcctcaaggacgccagc
gacgacccgtggtacgtgctggtcaaggacctggacaacaacgaactgatcgttggccag
ggcaatgatcatccgtggctgttttcgcgggcgctggtgtcttcggaaatctactgggtc
aacccgatcgacctgagcagcccgcgcaaactcaccgcaaaagtccgttatcgtcagagc
gaccagccgtgcacgctggaaaaaaccgctggcggctaccgggccacattcgatgacccg
caacgcgctgtaacgcccggccagtccgtggtgttctacgatggcgaaatctgtctgggc
ggcggcgtgatcgaaattgccgaaccctggaccagcaaggacaagcgttga
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