Pseudomonas syringae pv. tomato DC3000: PSPTO_3454
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Entry
PSPTO_3454 CDS
T00118
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_3454
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSPTO_3454
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AAO56929
UniProt:
Q87ZH5
LinkDB
All DBs
Position
complement(3896590..3897480)
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AA seq
296 aa
AA seq
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MNIKQLRAFLAVAQHLSFAQAGERLNLSQPALSLTIKGLEEDLGGQLLTRTTRNVGLTPE
GETLLPLARQLLADWDNTEELLRQRFTLQMGRVSIAAMPSFAGNLLPAALKVFRGRYPRV
NVAVHDVINEQVLEMVRHRRVELGIGFEPESSSALLFTPFYTDRFVAVVARDSPLAELGE
VSWAALLREDFIALQRPSAVRLLLEQAVEPLHGKLAVAFESHQLSTIGRMVANGLGVSAV
PSLCIGQMQELGACCIALVEPHIERRIGLMMLADHTLSAAAQTLRDVLIENARESR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaacaacttcgcgcctttctggctgtggcgcagcatttgagctttgcccag
gccggggagcggctgaacctgtcgcagcctgcgctgagcctgaccatcaagggcctggag
gaggatctcggcgggcaactgttgacgcgcaccacgcgcaacgtcggcctgacgccagaa
ggcgaaaccctgctgccgttggcgcgccagctattggccgactgggacaacaccgaagag
ctgctgcgccagcgcttcaccctgcaaatgggccgggtttcgatcgccgccatgccatcg
ttcgccggcaacctgctgcctgccgcactgaaggtttttcgcgggcgttacccgagggtc
aatgtcgcggtgcatgacgtgatcaacgagcaagtactggagatggtgcgtcaccgtcgc
gttgagctggggatcggtttcgagccggagtccagcagcgccttgctgtttacaccgttc
tatacggaccgcttcgtggcggtggtcgccagagattcgccactggccgaacttggcgag
gtgtcctgggcggcgctgttgcgcgaggactttattgcgttacaacggccgtcagccgtg
cgcttgctgctggagcaggccgtcgagcccctgcatggcaagctggcggtggcgtttgaa
agccatcagttgtcgaccatcgggcgcatggtcgctaatggcctgggcgtcagcgcggtg
ccgtcgctgtgcatcgggcagatgcaggaactcggggcctgttgcatcgcactggtagaa
ccgcacatcgagcgtcgtatcgggctgatgatgctcgccgatcacacattgtccgccgct
gcgcagactttgcgcgacgtattgatcgaaaacgctcgggaaagtcgatag
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