Pseudomonas syringae pv. tomato DC3000: PSPTO_3517
Help
Entry
PSPTO_3517 CDS
T00118
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00071
Fatty acid degradation
pst00280
Valine, leucine and isoleucine degradation
pst00310
Lysine degradation
pst00362
Benzoate degradation
pst00380
Tryptophan metabolism
pst00410
beta-Alanine metabolism
pst00640
Propanoate metabolism
pst00650
Butanoate metabolism
pst00907
Pinene, camphor and geraniol degradation
pst00930
Caprolactam degradation
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01120
Microbial metabolism in diverse environments
pst01200
Carbon metabolism
pst01212
Fatty acid metabolism
Module
pst_M00087
beta-Oxidation
pst_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSPTO_3517 (fadB)
00650 Butanoate metabolism
PSPTO_3517 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSPTO_3517 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSPTO_3517 (fadB)
00310 Lysine degradation
PSPTO_3517 (fadB)
00380 Tryptophan metabolism
PSPTO_3517 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSPTO_3517 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSPTO_3517 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSPTO_3517 (fadB)
00930 Caprolactam degradation
PSPTO_3517 (fadB)
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSPTO_3517 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSPTO_3517 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSPTO_3517 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSPTO_3517 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAO56992
UniProt:
Q87ZB2
LinkDB
All DBs
Position
complement(3967722..3969887)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAVKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVISSSARVGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENSAEDAL
KVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKGYDEVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYVYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYQPTAKLREMAANGQSFFGQASSE
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaacgagttg
cgtcaggcggtcgacgccgtcaaggccgacgcatcggtcaagggcgtgatcgtcaccagc
ggcaaggacgtgttcatcgtcggtgccgacatcaccgagttcgtcgacaacttcaagttg
ccggaagccgaactggttgcgggcaatctggaagccaacaggattttcagcgatttcgaa
gacctgggcgtgcccaccgttgtcgccatcaacggcattgcgctgggtggtggtctggaa
atgtgcctggccgcagactatcgagtcatctccagcagcgcccgtgtcggcctgccggaa
gtcaagctgggcctgtatccaggtttcggcggtaccgtgcgcctgccgcgcatcatcggc
gccgacaatgctatcgaatggatcgcatcgggcaaggaaaactccgcagaagacgcgctt
aaagtcggtgttgtcgatgcaatagtggctcccgagaagcttcaggccgcagcgcttgac
cttatccagcgcgctatttccggcgagttcgattacaaggccaagcgtcaaccaaagctg
gacaagctcaaactgaacgccatcgagcagatgatggcattcgagaccgccaagggtttt
gtcgcaggtcaagccgggccgaattacccggcgccggtcgaagccatcaagaccatccag
aaagccgccatctttggccgtgacaaggcactggaaatcgaagccgccggtttcgtgaaa
atggccaagacttcggccgcgcagagcctgatcggcctgttcctgaatgatcaggagctg
aaaaagaaagccaagggctacgacgaagtggctcgcgacgtgaaacaggccgccgtgctg
ggggccgggatcatgggcggcggtattgcctatcagtctgcggtcaagggcacgccgatc
ctgatgaaggacatccgcgaagaagccattcaactgggcctgaacgaagcctccaagctg
ctgggcggtcgccttgaaaaaggccgtctgaccgctgcgaagatggcagaagcgctaaac
gcgattcgtcctacgctgtcctacggcgatttcggcaatgtcgacctggtggttgaagcg
gttgtcgaaaaccccaaggtcaaacaggccgtactcgctgaagtcgaagccaacgtcggt
gaaaacaccattctggcttccaacacctcgaccatttccatcagcctgttggcgcaagcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaagaggctgtcgccaccaccgttgcc
tatgccaagaaaatgggcaagaacccgattgtggtcaacgactgcccgggctttctggtc
aatcgcgtgctgttcccgtacttcggcggtttcgccagactggtcagcgcgggcgtggat
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggccctgcgtacctg
atggacgttgtcggcatcgacaccggccaccacggccgtgacgtgatggctgaaggcttc
cccgaccgcatgaaagacgaccgtcgttctgccgttgacgcgttgtatgaagccaatcgt
ctgggccagaagaacggcaagggcttctatgtctacgagaccgacaagaagggcaagccc
aagaaggtcaacgatccggcggtgctggacgtgctcaagccgattgtctacgagcagcgt
gaagtcagcgatgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgctgcctggaagacggcatcgtcgaaacggctgccgaagctgacatgggcctgatctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gccgaattcgttgccctggccgatcgatatgccgagctgggtgccctgtatcaaccgacc
gcaaagctgcgtgagatggccgccaatggccagagcttcttcggtcaagcgtcttccgag
gtatga
DBGET
integrated database retrieval system
