Pseudomonas syringae pv. tomato DC3000: PSPTO_3646
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Entry
PSPTO_3646 CDS
T00118
Symbol
dnaZX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_3646 (dnaZX)
03430 Mismatch repair
PSPTO_3646 (dnaZX)
03440 Homologous recombination
PSPTO_3646 (dnaZX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_3646 (dnaZX)
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3646 (dnaZX)
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_3646 (dnaZX)
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPTO_3646 (dnaZX)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPTO_3646 (dnaZX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_18
TIP49
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
Rad17
SKI
DUF3646
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AAO57116
UniProt:
Q87YZ3
LinkDB
All DBs
Position
complement(4104984..4107215)
Genome browser
AA seq
743 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSEDAPRQPLKPVGISQATADSRKTVADATPVASPASTPPVVAAPDPAFEAQPPAYAPA
PAAVQPEAKAEPAPQIKPEPEPQPEPKPAPVEEIDLPWNESKAPVAEKPAEPEPEPEPEP
DPVAEVEAEPQPEPVAEPVLETVSEQPDLTPMPAPAPASPVPDAPQAQPSPPVEEQQVTP
AMLEAIPDSAYLSAPMDRDDEPPADDDYVEPDIDIDPASYSYLDELAHESVVELEAVEPE
PAPAAMPATGLAADWLEVFPKLPISGMTGSIAANCTLMAVDGDNWLLHLDPAHSALFNST
QQRRLNDALNQYHGRTINLSIELIKPEQETPAQAASRLRTERQRQAEASIQADPYIQQML
QQFGAVIREDTIKPVDAPVVQTQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggcccatgtgctcaaggccctgatcaacgcgctggacagccagcgcctgcaccacgcc
tatctgtttacaggtacgcgaggcgtcggcaagaccaccattgcgcggatcatcgccaag
tgcctgaactgcgaaaccggcatcacctcgacgccctgcggcacctgttcggtgtgcaag
gagatcgacgaaggccgttttgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaagacacccgcgagctgctggacaacgtgcagtacgcgcccagtcgcggacgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccactcgttcaatgccttgctc
aagacgcttgaagagccgccgccctacgtcaagttcattctggccaccactgatccgcaa
aagttgccggcgaccattctgtcgcgctgcctgcagttttccctgaaaaacatgacgccc
gagcgcgttgtcgagcatctgacccacgtgctgggcgtcgaaaacgtgccgtttgaagat
gacgcgctgtggttgctcgggcgcgctgccgacggttcgatgcgcgatgccatgagcctc
accgatcaggcgattgcctttggtgaaggcaaggtcatggcggccgacgtgcgcgccatg
ctcggcacgctggatcacggccaggttttcgatgtgctgaccgcgctgctggaaggtgac
gcccgtggtgtgctggaagccgtgcgccatctggccgagcaggggcctgactggaatggc
gtactctcggaaattctcaacgtgctgcaccgcgtggcaattgcccaggcgttgcccgaa
ggcgtcgacaacggccatggcgaccgcgaccgggtgctggccctggcgcaggcactgccc
gccgaagacgtgcagttttattaccagatgggcctgatcggccgtcgtgacctgccgctg
gcaccggacccgcgtggcggtttcgagatggtcctgctgcgcatgctggcgtttcgtccg
gctgacagcgaagacgctcccaggcaaccgctaaagccagtggggatcagccaggccacg
gctgattcccgcaaaacggtggctgatgcgacacctgttgcatcgcccgcttcgacgccg
ccggtcgtggctgcgcctgaccctgccttcgaagcgcagccgcctgcgtatgcgccggcg
ccggctgctgttcagccagaggcaaaagccgagcctgcgccgcaaatcaaacccgagcct
gagccgcagcctgaacccaagcctgcgccggtcgaagaaatcgatctgccgtggaacgag
tcgaaagcgccggtggccgaaaagcctgccgagcccgagcccgagcccgagcccgagccc
gatcctgtggcagaagttgaagcagagccccagcctgagccggtagccgaaccggttctg
gaaacggtttccgagcagccggacctcacgccgatgccagcccctgcgcccgccagcccc
gtgccggatgcgccgcaggcccagccgtcgccgccggttgaggaacagcaggtcacgcct
gcgatgctcgaagcgattcctgactcagcctatctgtccgccccgatggaccgcgatgac
gaaccgccagcggacgacgattacgtcgagccggacatcgacatcgacccggcgtcgtat
agctatctggatgaactggcccacgagagcgtcgtcgagctcgaggccgttgagcccgag
cctgctccggccgccatgccggccaccggtcttgctgccgattggcttgaagtgtttccc
aaactgccaatctccggcatgaccggcagcatcgccgccaactgcacattgatggcggtc
gatggcgacaactggctgctgcacctggacccggcgcacagcgcgctgttcaactccacg
caacagcgccgcttgaacgatgcgttgaaccagtaccatgggcgcacgatcaacctgagt
atcgagctgatcaagcccgagcaggaaacccctgcccaggccgcttcacgcttgcgcacc
gaacgccagcgtcaggccgaagcctcgattcaggctgacccgtacatccagcagatgctc
cagcagtttggcgctgtgatccgcgaagatacgatcaagcccgtggacgcgccggtggtg
cagactcaataa
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