Pseudomonas syringae pv. tomato DC3000: PSPTO_3689
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Entry
PSPTO_3689 CDS
T00118
Name
(GenBank) conserved protein of unknown function
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3689
Enzymes [BR:
pst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PSPTO_3689
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PSPTO_3689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AAO57158
UniProt:
Q87YV3
LinkDB
All DBs
Position
complement(4155617..4157155)
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AA seq
512 aa
AA seq
DB search
MTQSHQLHLVLGDQLSFELASLQNLNPEHATVLLVEVMEEASHVPHHPQKIALIFSAMRH
FAEALRERGVRVQYVTLDDAQNTGSVPGELRRWQALLNAEQLHITECGDWRLEQSIKDGG
LPIQWYADTRFLCSRDEFAARAHGKKQLRMEFFYREMRRKSRLLLNGDGTPVGGAWNFDA
ENRKALPKGVAAPYPMRFSADAITRDVLTLVAERFASHYGSLDTFDYPVTQADAQALWEY
FLDFGLAGFGDYQDAMATDEPFLFHARISAALNIGLLDLRQICSDVESAYWSGRVALNAA
EGFIRQLIGWREYVRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETKMNCMSQAIGQSLK
HAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYIKRMSDYCRGCAYKVTESTTDDACPFNALYWHFLMRHSDQLRRNQRMGMI
YKNLDRMAEAKQQALWERGEHLLARLDAGEAL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatcccaccaactccatctcgttctaggcgatcagctctccttcgagctggcc
tccctgcagaacctgaaccccgagcacgcaacggtcctgctggtcgaggtgatggaggag
gcgagtcatgtgccgcatcatccacagaaaatcgcgttgatcttcagcgccatgcgtcat
tttgccgaggcgttgcgcgagcgtggggttcgggtgcagtacgtgacgctcgatgatgcg
caaaacacaggctcggtgccgggcgaattgcgtcgctggcaggccttgttgaacgctgag
caattgcacatcaccgagtgcggcgactggcggttggagcagtcgatcaaggacggtggg
ctgccgattcagtggtatgccgatacgcgctttctttgttcccgtgatgagttcgcggca
agggcgcacggtaaaaagcagttgcgcatggagtttttctaccgggagatgcggcgcaaa
agcaggttgctattgaacggtgacggtacgccggtcggcggtgcctggaacttcgatgcc
gagaaccgcaaggcgctgcccaagggcgtggccgcgccgtacccgatgcgcttttcggca
gatgcgatcactcgcgacgtgctgacgctggtggcggagcgtttcgccagccactatggc
tcgctggataccttcgactaccccgtcacgcaggcggatgctcaggcgttgtgggagtat
tttctggattttggtctggcgggtttcggcgattatcaagacgcgatggccaccgatgag
ccttttctgtttcatgcgcgcatcagcgcggcgctgaacatcgggctgctggacttgcgc
cagatttgcagcgatgtcgagtccgcgtattggtcgggcagggtggcgctgaatgccgcc
gaagggtttatccgccaattgattggctggcgcgaatacgtgcgtggcgtctactggttg
aagatgcctgactacgccagcggcaacctgtttggcaacagccggccgctcccggagttt
tactggaccggtgaaacgaagatgaactgcatgagccaggcgatcggccagagcctgaaa
catgcctatgcccatcatattcagcgcctgatggtgaccggcaactttgccttgctcgcc
ggtatcgtgccggagcagatctgcgagtggtacctggcaatctacatggacgcgttcgac
tgggtcgaactgcccaacacgctgggcatggtcatgcacgccgatggcggctatctgggc
tccaagccttattgtgccagtggtcagtacatcaagcgcatgtctgattactgccgtggc
tgcgcctataaggtaactgaaagcacgaccgacgatgcctgtccgttcaacgcgctctac
tggcatttcctgatgcgtcacagcgaccagttacgtcgtaaccagcgcatgggcatgatc
tacaagaaccttgatcgcatggccgaggccaagcaacaggcgctgtgggagcgcggcgag
cacttgctggccaggctcgacgcaggagaggcgctttga
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