Pseudomonas syringae pv. tomato DC3000: PSPTO_3711
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Entry
PSPTO_3711 CDS
T00118
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_3711 (dnaQ)
03430 Mismatch repair
PSPTO_3711 (dnaQ)
03440 Homologous recombination
PSPTO_3711 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_3711 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3711 (dnaQ)
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_3711 (dnaQ)
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPTO_3711 (dnaQ)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPTO_3711 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAO57180
UniProt:
Q87YT1
LinkDB
All DBs
Position
complement(4188612..4189385)
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AA seq
257 aa
AA seq
DB search
MQNLDNRSIVLDTETTGMPVTDGHRIVEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIG
VHGITNEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGAQDKADITR
HCKILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLAMTGGQT
SLSLAGNASDGNGSAEGSGNRGSEIRRLPADRKPCRVIRASESELAEHEVRMTTIAKATG
APALWVQMLEAGAQASS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaacctggacaacagatcgatcgttctcgacaccgaaaccaccggtatgccagtg
accgatggtcaccgtatcgtcgagattggttgtgtcgaactgattggccgccgcctgacc
gggcggcattttcacgtttacctgcaacccgaccgcgaaagtgacgaaggcgcaatcggt
gttcacggcatcaccaacgagtttctggtcggcaagccgcgctttgccgaagttgccgat
gagttcttcgagttcatcaagggcgcgcaactgatcatccacaacgcagcgttcgacgtt
ggtttcatcaacaacgaattcgccttgatgggtgcgcaggacaaggccgacatcacccgg
cactgcaagattctcgacaccctgatgatggcccgcgagcgccatccggggcagcgcaac
agcctcgatgcgctgtgcaaacgctatggcgtcgacaactcgggtcgtgagctgcacggc
gctttgctcgactccgagattctggccgacgtctatctggcgatgaccggcgggcagacc
agcctgtcgctggccggcaacgcctcggatggcaacggctccgctgagggctccggcaat
cgcggcagcgaaattcgccgcttgccagctgatcgcaagccttgccgagtcattcgtgcc
tcggaaagtgaactggccgagcacgaagtccgtatgaccaccatcgccaaggccaccggt
gcgcctgccctgtgggtacaaatgctggaagccggggcacaggcctcttcctga
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