Pseudomonas syringae pv. tomato DC3000: PSPTO_3723
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Entry
PSPTO_3723 CDS
T00118
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_3723 (hupB)
03036 Chromosome and associated proteins [BR:
pst03036
]
PSPTO_3723 (hupB)
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3723 (hupB)
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSPTO_3723 (hupB)
Chromosome and associated proteins [BR:
pst03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSPTO_3723 (hupB)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSPTO_3723 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
Motif
Other DBs
NCBI-ProteinID:
AAO57192
UniProt:
Q87YR9
LinkDB
All DBs
Position
complement(4203816..4204088)
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AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARIG
RNPQTGKTLEIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatatcccgaaagctgct
gctggccgtgcgctggacgcagtgatcgaatccgtcactggcgctctgaaggctggcgac
tcggttgttttggttggctttggtacgttctccgtgactgatcgtcctgctcgcatcggt
cgcaatcctcagaccggtaagacgctggaaatcgctgctgctaaaaaaccaggtttcaaa
gccggtaaagctctcaaagaagctgtcaactaa
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