Pseudomonas syringae pv. tomato DC3000: PSPTO_3817
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Entry
PSPTO_3817 CDS
T00118
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pst03016
]
PSPTO_3817 (truA)
Enzymes [BR:
pst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSPTO_3817 (truA)
Transfer RNA biogenesis [BR:
pst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPTO_3817 (truA)
Prokaryotic type
PSPTO_3817 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABK79682
UniProt:
A0PCI5
LinkDB
All DBs
Position
complement(4324935..4325759)
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AA seq
274 aa
AA seq
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MAAEGFSRIALGVEYKGSRYCGWQRQASGVLTVQETLENALSKVAASPVSLMCAGRTDAG
VHACGQVVHFDTQAERSLKAWVMGANINLPHDVSVSWARVMPATFHARFKAIARRYRYVI
YNDQIRPAHLNQEITWNHRPLDVERMAQAAEYLVGTHDFSAFRAGQCQAKSPIKQLHHLR
VTRHGKMIVIDVRANAFLHHMVRNIAGVLMTIGAGERPVEWARDVLESRVRRTGGVTAHP
YGLYLVQVEYRDEFPLPERYIGPHFLTGFTELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagggcttttcccgaatcgcgttgggcgtcgagtacaaaggctcgcgctat
tgcggctggcagcgccaggcctccggtgtgctgacggtgcaggaaacccttgaaaatgcg
ttgtccaaggttgcggcttcacccgtctcgctgatgtgtgccgggcgtacagacgcgggc
gtgcacgcctgcgggcaggtggtgcatttcgatacccaggccgagcgttcactgaaagcc
tgggtcatgggcgccaacatcaacctgcctcacgacgtcagcgtgtcgtgggccagggtt
atgcctgccacgtttcatgcgcgcttcaaagccatcgcccgtcgttatcgctacgtgatc
tacaacgatcagatccgcccggcgcacctgaatcaggaaattacctggaaccaccgcccg
ctggacgtcgagcgcatggcgcaggcggcggagtatctggtggggacgcatgacttcagc
gcctttcgtgccggtcagtgccaggccaagtcgccgatcaaacagttgcaccacctgcgc
gtgacccggcacggcaagatgatcgtgatcgatgtacgcgccaatgcctttttgcaccac
atggtgcgcaatatcgccggcgtactgatgactatcggggccggtgagcgcccggtcgaa
tgggcgcgtgatgtgcttgaaagccgcgttcggcgtaccggcggagtgacggctcatccg
tatggtctgtacctggttcaggtcgagtaccgtgacgaatttccgttacccgagcgctac
atcggtccgcactttcttacaggctttacagaattggacggctga
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