Pseudomonas syringae pv. tomato DC3000: PSPTO_3880
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Entry
PSPTO_3880 CDS
T00118
Name
(GenBank) polyamine ABC transporter, permease protein, putative
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_3880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_3880
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_3880
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Sarcolipin
Motif
Other DBs
NCBI-ProteinID:
AAO57346
UniProt:
Q87YC1
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All DBs
Position
4392028..4392870
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AA seq
280 aa
AA seq
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MTRFSRGKWLGLLCLLPFAVFFIVFQIAPLLWVAIHSLQSDAGWGWENFTRAFSSKFYRQ
AIQYSLEISFWSSLFGIIISVLGAYSLRKVDSRLRDFVNSFANMTSNFAGVPLAFAFIIL
LGFNGALTLILKQTGIIDDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDAVREDWNESAA
LLGASSYQFWRYIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVA
GDITLDPNMASALAMILVGLMTLVTVVHQWLLKRSYHVSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgattttcccgaggcaaatggctggggctgttgtgcctgctgccctttgccgtg
tttttcatcgtatttcagatagcgccgctgctctgggtggcgatccacagcctgcaaagc
gatgccggctggggctgggaaaactttaccagggcgttcagctcgaagttctaccgtcag
gcgatccagtacagcctggagatcagcttctggtcgagcctgttcggcatcatcatctcc
gtgctgggcgcctattcgctgcgcaaggtggactcgcggctgcgcgacttcgtcaactcg
ttcgccaacatgaccagcaactttgccggcgttccactggcatttgccttcattatcctg
ctgggcttcaacggcgcactgaccctgatcctcaagcagaccggaatcattgatgacttc
aacctgtattccaagaccgggctgatcatcctttacacctactttcagatcccgcttggc
gtgctgctgctctacccggcattcgatgccgtgcgcgaggactggaacgagtcggcggcg
ctgttgggggccagcagttatcagttctggcgctacattggcctgccggtattgactccg
gcgctgctcggcacgtttgtgattctgctggccaatgcgctgggcgcctacgccacggta
tatgccctgaccaccggcaacttcaacgtgctgccgatccgcattgccgcgatggtggca
ggcgatattactctggacccgaacatggccagtgccctggcgatgattctggtcgggctc
atgaccctggtgacggtggtccatcagtggctgttgaagaggagctaccatgtctcgcgc
tga
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