Pseudomonas syringae pv. tomato DC3000: PSPTO_3977
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Entry
PSPTO_3977 CDS
T00118
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPTO_3977 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3977 (ruvB)
Enzymes [BR:
pst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSPTO_3977 (ruvB)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPTO_3977 (ruvB)
RecFOR pathway proteins
PSPTO_3977 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_14
nSTAND3
Mg_chelatase
AAA_17
AAA_16
RNA_helicase
ABC_tran
Rad17
AAA_2
AAA_28
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
IstB_IS21
TIP49
Sigma54_activ_2
NACHT
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AAO57436
UniProt:
Q87Y35
LinkDB
All DBs
Position
complement(4483595..4484533)
Genome browser
AA seq
312 aa
AA seq
DB search
MELFIQAARGRSEALDHTLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAI
LTNLEPNDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGMLTNPLRDRFGIVQRLEFYNIADLSTIVARSAGILGLVIEPAGAFEIARRARGTP
RIANRLLRRVRDFAQVRGNGQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGP
VGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPTRMGEMP
VAGEFVDDAADL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttcatccaggctgcccgaggccgcagcgaggcgctggaccacacgctgatc
ttcggcccgcccggtctgggcaagacgaccctggccaatatcatcgcccaggaaatgggc
gtgtcgatcaagagcacctccggcccggtgctggagcggcccggtgatctggcggcaatc
ctgaccaaccttgaaccgaacgacgtgctgtttatcgacgagattcatcggttatcaccg
attgtcgaggaagtgctgtatccggcgatggaggacttccagctcgacatcatgattggc
gaaggccctgcagcacgctcgatcaagcttgatctaccaccgtttacgctggttggcgca
accacccgcgcgggcatgctgaccaacccgctgcgcgaccgcttcgggattgtgcagcgc
ctggagttctacaatattgccgatctttcgacgatcgtggctcgttcggcaggcattttg
gggctggtcatcgagcccgcaggtgcgttcgagatcgccagacgcgcccgtggtacgccg
cgtatagccaaccgtttgttgcgccgcgtgcgggacttcgcccaggtgcgtggcaatggt
cagatcacccggcagacagccgacaaggcgcttaacctgctggatgtcgacgagcacggc
tttgatcatcaggacaggcgtctactgctgaccatgatcgagaagtttgacggcgggcct
gtcggtgtcgacagcctcgcggccgcgatcagtgaagagcgtcacacaattgaagacgta
ctggagccctatttgatccagcaaggctatatcatgcgcacacctcgcgggcgcgtggtc
acccgtcatgcgtatctgcatttcgggctgaacattccgacgaggatgggcgagatgccg
gtcgcaggtgaatttgtcgacgatgccgcggatttatag
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