Pseudomonas syringae pv. tomato DC3000: PSPTO_3978
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Entry
PSPTO_3978 CDS
T00118
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPTO_3978 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_3978 (ruvA)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPTO_3978 (ruvA)
RecFOR pathway proteins
PSPTO_3978 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
Transposase_20
HHH_8
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AAO57437
UniProt:
Q87Y34
LinkDB
All DBs
Position
complement(4484657..4485265)
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AA seq
202 aa
AA seq
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MIGRLRGAIAEKQPPHLVLDVNGVGYELEVPMTTLYRLPHVGETVTLHTHLVVREDAHLL
YGFYEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALTRIPGVGKKT
AERLLVELKDRFKAWESLPGTFTLVSNGPNHADPVASAESDAVSALISLGYKPQEASKAV
SAIKEKDLSSADLIRRALKGMG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgtttacgcggcgccattgccgaaaaacagcctccgcacctggtgttggat
gtcaacggcgttggctatgagctggaagtgccgatgacgacgctgtacaggctgccgcat
gtcggcgagaccgtgaccttgcacacccatctggtggttcgcgaggacgcgcatctgctg
tatggcttctatgaaaaacgcgagcgtgagctgtttcgtgagctgatccgtctgaacggc
gtcgggccgaagctggcgctggcattgatgtccggtctggaagtcgatgagctggtgcgc
tgcgttcaggctcaggatacgtccgcgctgacccgtatccccggtgtcggcaagaagact
gccgaacgtctgctggtcgagctcaaggatcgtttcaaggcctgggagagcttgccaggc
acttttacactggtttccaatggtccgaatcacgcagatcccgtggcctcggccgagtcc
gatgcggtcagtgcgctgatttcgctgggctacaaacctcaggaggcgagcaaggccgtc
tccgcgatcaaggaaaaagacttgagcagtgcagatctgattcgccgtgcgttgaagggg
atgggttaa
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