Pseudomonas syringae pv. tomato DC3000: PSPTO_4019
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Entry
PSPTO_4019 CDS
T00118
Name
(GenBank) conserved hypothetical protein TIGR01125
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pst03009
]
PSPTO_4019
Enzymes [BR:
pst01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSPTO_4019
Ribosome biogenesis [BR:
pst03009
]
Prokaryotic type
ribosomal protein modification factors
PSPTO_4019
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AAO57476
UniProt:
Q87Y01
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All DBs
Position
4530408..4531739
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AA seq
443 aa
AA seq
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MTAKAPRVGMISLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDTAKAE
SLEVIGEAIKENGKVIVTGCMGVDASVIRAVHPSVLSVTGPQQYEQVVNAVHDVVPPRKD
HNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAKRL
VKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPDLIIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVKQDRW
DRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLEDGSTV
QPGDKIMCRVTDADEYDLWAEML
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaagccccacgtgtaggaatgatatcgttagggtgccccaaggcgctcgtt
gactccgaacgcatcctgacccaactgcgcatggaaggttacgaagtcgttgcgacctac
gaggacgccgacgtggttgtggtcaatacctgcggcttcatcgacacggccaaggccgag
tcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcaccggctgc
atgggcgtcgatgcgagcgtgattcgcgccgtacacccgagtgtgctgtcggtgaccggc
ccgcagcagtacgagcaggtggtcaatgccgtgcacgatgtcgtgccgccccgcaaggat
cacaacccgctgatcgacctggtgccgccgcaaggcgtcaagctgaccccgcgccattac
gcgtacctgaagatttccgaaggctgcaaccacagttgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtgagccgtccggttggcgatgtgctggatgaggccaagcgtctg
gtcaaatccggcgtgaaggaattgctggtgatttcccaggacaccagcgcctacggcgtc
gatgtcaaataccgcaccggtttctgggacggtcagccggtcaagacccgcatgaccgag
ctgtgtcaggctctgggctcgatgggggtctgggttcgtttgcactatgtctacccgtac
ccgcacgtcgatgagctgatcccgctgatggcggcaggcaagattctgccgtacctggac
atccccttccagcacgccagcccgaaaatcctcaagctgatgaagcgcccggcctttgaa
gacaagactctggcgcgtatcaagaactggcgcgagcagtgccctgatctgatcatccgt
tcgacgttcatcgtcggcttccctggtgaaaccgaagaggacttccagtacctgctggac
tggctgaccgaagcccagctggaccgcgttggctgcttccagtactcgccggtagaaggt
gctcctgccaacctgctggacgccgccattgtgccggatgacgtcaagcaggatcgctgg
gatcgcttcatggctcatcagcaggccatcagcgccgcccgcctgcagatgaagatcggc
aaggaaatcgaagtgctgatcgacgaagtcgatgatcgcggcgcggtaggccgttgtttc
ttcgacgcgccggaaatcgatggcaacgtgtttatcggccttgaagacggtagcaccgtc
cagccgggcgacaagatcatgtgtcgcgtcaccgacgccgacgaatatgacctgtgggcc
gagatgctctga
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