Pseudomonas syringae pv. tomato DC3000: PSPTO_4021
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Entry
PSPTO_4021 CDS
T00118
Name
(GenBank) S4 domain protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pst03009
]
PSPTO_4021
Enzymes [BR:
pst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
PSPTO_4021
Ribosome biogenesis [BR:
pst03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSPTO_4021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AAO57478
UniProt:
Q87XZ9
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All DBs
Position
4532376..4533086
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AA seq
236 aa
AA seq
DB search
MTDPIRLSKRLIELVGCSRREAELFIEGGWVTVDGVVIDEPHFKVSTQKIELSPDAKADS
PESVTIILHKPASASAESALQMITPGTLSAEHSYSKRPLKGHFMRLEAISSLQANASGLM
VFSQDWKILRKLTDDRSKIEQEYVVEISGEMVAHGLNRLNHGLTYKGKELPAVKASWQNE
NRLRFAMKNPQPGIIALLCEAVGLKIVAIRRIRIGGVSMGKLPEGQWRYMTTKEKF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccccattcgcctttccaaacgccttattgagctggtcggttgctcccgccgg
gaggccgaactgtttatcgagggtggctgggtcacagtggatggcgtggttatcgacgag
ccgcacttcaaggtcagcacccagaaaatcgaactgagcccggacgccaaggccgattcg
ccggaatcagtcaccatcattctgcacaagcctgcctcggccagcgccgaaagcgccttg
caaatgattaccccgggcaccctttctgcagagcatagctacagcaagcgtccgctcaag
ggccatttcatgcgccttgaggcgatttcgagcctgcaagccaatgccagcgggctgatg
gtgttcagccaggactggaaaatcctgcgcaagctcaccgacgaccgcagcaagatcgag
caggaatacgtggtagaaatctcgggcgagatggtcgctcacggcctgaaccgtctcaac
cacggcctgacctacaagggcaaggaattgcccgccgtgaaggccagctggcagaacgag
aaccgcctgcgttttgcgatgaaaaacccgcagcccggcatcatcgcccttttatgtgag
gccgtcggcctgaaaatcgtcgccattcgccgcatccgcatcggcggcgtgtccatgggt
aaactgcccgaaggccagtggcgctacatgacgaccaaggaaaagttctga
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