Pseudomonas syringae pv. tomato DC3000: PSPTO_4097
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Entry
PSPTO_4097 CDS
T00118
Symbol
fadD-1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00061
Fatty acid biosynthesis
pst00071
Fatty acid degradation
pst01100
Metabolic pathways
pst01212
Fatty acid metabolism
pst02024
Quorum sensing
pst04146
Peroxisome
Module
pst_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSPTO_4097 (fadD-1)
00071 Fatty acid degradation
PSPTO_4097 (fadD-1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSPTO_4097 (fadD-1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_4097 (fadD-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pst01004
]
PSPTO_4097 (fadD-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pst04147
]
PSPTO_4097 (fadD-1)
Enzymes [BR:
pst01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSPTO_4097 (fadD-1)
Lipid biosynthesis proteins [BR:
pst01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSPTO_4097 (fadD-1)
Exosome [BR:
pst04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSPTO_4097 (fadD-1)
Exosomal proteins of breast cancer cells
PSPTO_4097 (fadD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAO57553
UniProt:
Q87XS9
LinkDB
All DBs
Position
complement(4616449..4618140)
Genome browser
AA seq
563 aa
AA seq
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MIENFWKDKYPSGIAADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFKD
SGAKALVCLANMAHLAEKVVPKTQIKHVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH
LPQSVRFNDVLAKGHGQPVTDVSPGAVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCK
ALMASELGEGCEIIITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPSMVKELSKWK
FSGFVGLNTLFVALCNSEGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCPVCEGYGM
TETSPVATVNPSEYIQMGTIGIPVPSTLCKVIDDVGNELAFGETGELCIKGPQVMKGYWQ
RQEATDEMVDSDGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGESIKVFVVAKPGVTLTKDQIMVHMRANLTAYKVPRSVEFRDVLPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaacttctggaaggacaaatacccgtccggtatcgctgccgatatcaacccc
gacgagtatcccaatgtccaggcggtcctgaagcagtcctgccagcgcttcgccgacaaa
ccggcgttcagcaatctgggcaagaccctcacctacggtgagttgtatgaactgtccggc
gcgttcgcggcctggatccagcaacacaccgacctgcagccgggcgaccgtatcgccgtg
cagttgcccaacgtgctgcaatatccgattgccgtcttcggtgcgattcgcgccggattg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaaagat
tccggtgccaaggcgctggtgtgcctggcaaacatggcgcacctggccgagaaggtcgtg
cccaaaacgcagatcaagcacgtcattgtcaccgaagtcgccgacatgctctcgccgttc
aaacgcttgttgatcaacagcgtcatcaagtacgtgaagaaaatggttccggcgtaccac
ctgccgcagtccgtcaggttcaacgacgtgctcgccaagggccatggccagccggtgacc
gacgtctcgcccggcgccgtcgatgtcgccgtgctgcaatacaccggcggcaccacgggc
gtagcgaagggtgcgatgctcactcaccgcaacctgatcgccaacatgctgcaatgcaag
gcgttgatggcgtccgaacttggcgaaggctgtgaaatcatcatcacgccgttgccgctg
tatcacatctacgccttcacctttcactgcatggcgatgatgctgatcggcaatcacaac
atcctgatcagcaacccgcgtgatctgccgtcgatggtcaaggaactgtcgaaatggaag
ttcagcggttttgtcggcctcaacacgctgtttgtggccttgtgcaacagcgagggcttc
cgcaatctcgatttttcggcactcaaagtgaccttgtccggtggcatggccttgcagcaa
gccgccgccgaacgctggaagcaggtcacgggctgtccggtctgcgaaggctacggcatg
accgagaccagcccggtggctacggtcaatccttctgagtacattcagatgggcaccatc
ggcattcccgtgccgtcaacgctgtgcaaggtcatcgatgatgtcggcaacgaactggca
ttcggtgaaaccggcgagctgtgcatcaaaggcccgcaagtgatgaaaggctactggcag
cgccaggaggccaccgacgaaatggtcgacagtgacggctggctcaagacgggtgacatc
gcgatcatccagcctgatggctacatccggattgtcgatcgcaagaaggacatgatcctg
atctctggtttcaacgtgtaccccaacgaactggaagacgtgctggccacgctgcctggc
gtgctgcaatgtgcagcgatcggtataccggatgaaaaatcgggcgaatccatcaaggtt
tttgttgtggccaagcctggtgtaacccttaccaaggatcagattatggtgcacatgcgc
gccaacctgacggcctacaaagtgccacgcagcgtggagtttcgcgacgtactgccaacc
accaacgtcggcaagatcctgcgtcgcgaactgcgtgatgaggaattgaagaagctgggt
ttgaagaagtag
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