Pseudomonas syringae pv. tomato DC3000: PSPTO_4098
Help
Entry
PSPTO_4098 CDS
T00118
Symbol
fadD-2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00061
Fatty acid biosynthesis
pst00071
Fatty acid degradation
pst01100
Metabolic pathways
pst01212
Fatty acid metabolism
pst02024
Quorum sensing
pst04146
Peroxisome
Module
pst_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSPTO_4098 (fadD-2)
00071 Fatty acid degradation
PSPTO_4098 (fadD-2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSPTO_4098 (fadD-2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_4098 (fadD-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pst01004
]
PSPTO_4098 (fadD-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pst04147
]
PSPTO_4098 (fadD-2)
Enzymes [BR:
pst01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSPTO_4098 (fadD-2)
Lipid biosynthesis proteins [BR:
pst01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSPTO_4098 (fadD-2)
Exosome [BR:
pst04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSPTO_4098 (fadD-2)
Exosomal proteins of breast cancer cells
PSPTO_4098 (fadD-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAO57554
UniProt:
Q87XS8
LinkDB
All DBs
Position
complement(4618496..4620184)
Genome browser
AA seq
562 aa
AA seq
DB search
MQADFWDDKRPAGVDSNVDLQAYQSVIDVFERCCKKFADRPAFSNMGVTLTYAELDRHSA
AFTAYLQQHTQLMPGDRIAVQMPNLLQYPIAVFGAMRAGLIVVNTNPLYTAREMRHQFKD
SGAKALVYLNMFGKLVQEVLPDTAIEHLIEVKMGDMQSAAKGWLVNIIVDKVKKLVPPFR
LPQAVGFKRALQLGRDSRVQAVAQTLDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVY
ACMRQDRPEGGPVFEEGSEVMIAPLPLYHIYAFTANCMCMMISGNHNILITNPRDIAGFI
KELGKWKFTAMIGLNTLFVALMNHPEFKKLDFSALKSTNSGGTALVKATAERWAQITGCT
IVEGYGLTETSPVASANPYGTQARLGTVGIPVPGTAMKVIDDEGVELAFGERGELCIKGP
QVMKGYWNRPDATAEALDAEGWFKTGDIAVIAADGFVSIVDRKKDLIIVSGFNVYPNEIE
DVIMTHSKVANCACIGVPDERSGEAVKLFVVPRDPSVSVEELKAFCKENFTAYKVPKLIV
LRDSLPMTPVGKILRRELRDPA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatttctgggatgacaagcgtccggcgggtgtcgattccaacgtggatcta
caggcctatcaatcggtcatcgacgtgtttgaacgctgctgcaagaagttcgcggaccga
cctgcgttcagcaacatgggcgtgaccctgacttatgccgagcttgatcgtcattcagcc
gcgttcaccgcttatctgcaacagcacacgcaactgatgccgggtgaccgtatcgccgtg
cagatgcccaacctgctgcaataccccattgctgtattcggtgccatgcgtgccggtctg
atcgtggtcaacaccaacccgttgtacaccgcgcgcgagatgcgccatcagttcaaggac
tcgggtgccaaggcactggtctacctcaatatgttcggcaagctggtgcaggaagtgctc
ccggacaccgccatcgaacatttgattgaagtgaagatgggcgacatgcagtcggcggcc
aaggggtggctggtcaacatcattgttgacaaggtcaagaagctggtcccgccattccgg
ttgccccaggctgtcggcttcaagcgggcactgcaactggggcgtgacagccgggtgcag
gccgtggcgcaaaccctcgacgacgtcgccgtgctgcaatacaccggtggcaccacgggg
ctggccaagggtgcgatgctgacgcatggcaatctggtcgccaacatgcagcaagtctat
gcctgcatgcgccaggaccgtcccgagggtggtccagtgtttgaggagggctcggaggtg
atgattgcgccgctgccgctttatcatatctatgcattcacggcgaactgcatgtgcatg
atgatcagcggcaaccacaacatcctgattaccaacccgcgtgacatcgccggcttcatc
aaagaactgggcaagtggaagttcaccgccatgatcggtctcaatacgctgttcgtggcg
ctgatgaaccatcccgagttcaaaaagctggatttctcggcgctgaaaagcacaaactca
ggcggcactgcgctggtcaaggccacggccgagcgctgggcgcagatcaccggctgcacg
attgtcgagggctacggcctgactgaaacgtcgcctgtggccagcgccaacccttatgga
acgcaggcgcgtctgggtacggtcggtattccggtgcccggcactgccatgaaagtcatc
gatgacgagggcgtggagcttgcgttcggcgagcgcggcgaattgtgcatcaaggggccg
caggtcatgaaaggctactggaatcgtccggatgccacggccgaagcactcgacgccgaa
ggctggttcaagactggcgacattgccgtgatagctgccgacgggttcgtcagtatcgtg
gatcgcaaaaaggacctgatcatcgtttcaggtttcaacgtctaccccaacgaaatcgaa
gacgtgatcatgactcattccaaggtggccaactgcgcctgcatcggcgtgccggacgag
cgctccggcgaggcggtgaagctgtttgtcgtgccgcgggacccaagcgtgagcgttgaa
gaactcaaggcgttctgcaaagagaatttcaccgcttacaaggtgcccaagcttattgtt
ctgcgcgattcgttgcccatgacaccggtgggcaagattttgcgcagggagcttcgcgac
ccggcctga
DBGET
integrated database retrieval system
