Pseudomonas syringae pv. tomato DC3000: PSPTO_4135
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Entry
PSPTO_4135 CDS
T00118
Name
(GenBank) DNA ligase, ATP-dependent
Organism
pst
Pseudomonas syringae pv. tomato DC3000
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
DUF6926
Motif
Other DBs
NCBI-ProteinID:
AAO57591
UniProt:
Q87XP1
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Position
4661176..4662891
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AA seq
571 aa
AA seq
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MKAFAELYAQLDATTSSNAKLAAMRDYFEKAAAEDAAWAVYFLSGGRPRQLVPTRVLREQ
AMTLASLPEWLFEESYQAVGDLAETLSLLLPQADHSNDEGLATWMEDKLLPLRGLPPEEL
AARLPMFWSQLDRSSLMVCIKLITGSFRVGVSKLLVTRALAALADIDSKRVAQRLVGYTD
LSHRPSAERYLKLIAPESEDEHAQRGGQPYPFFLAHSLQQPADQFETLLGPAENWQVEWK
WDGIRAQLVKRDGRLWIWSRGEELVTDRFPELHSLAQCLPDGTVIDGEIVVWKAPDINPD
ISHDSDAAFALDNDAPNAAPSVQPFALLQQRIGRKTLGKKILTDIPVVVLAYDLLEWQGA
DWRSRPQHERRTQLETLIDSCQSEVLMPSPVLTGKDWLDLATQREASRSLGVEGMMLKAR
DSLYGVGRTKDMGVWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPEASER
TLVPFAKAYSGLTDEEMRKVDAIVRKTTVEKFGPVSSVTPTLVFELGFEGIALSKRHKSG
IAVRFPRMLRWRQDKPVAEADSLTTLQDLLN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcgccgaactctatgcacagctggacgccaccacgtcgagcaacgccaaa
ctcgccgccatgcgcgactatttcgaaaaagcggcggcagaggacgcagcctgggccgtg
tacttcctgtccggtggacgccccaggcaactggtgccgacccgcgtgctgcgcgagcaa
gccatgacactggcgagcctgcctgaatggttgttcgaagaaagctatcaggccgtcggc
gacctggcggaaaccctgtcattgctgctgccgcaggccgaccacagcaacgacgaaggc
ctggccacgtggatggaagacaagctgctgccattgcgcggcctgccgcccgaagagctg
gccgcgcgcttgcccatgttctggtcgcaactggaccgcagcagcttgatggtttgcatc
aagctgatcaccggcagctttcgcgtcggcgtatcgaaattgctggtcacccgcgcactg
gcagcgctggctgacatcgacagcaagcgcgttgcgcaaaggctggtcggctacacagac
ctgtcgcatcggcccagcgccgagcgctacctcaagctgatcgcgcctgaatcggaagat
gaacacgcgcaacgtggcggtcagccctatccgttctttcttgcgcactccttgcagcag
cctgccgaccagttcgagacgttgctggggccggccgagaactggcaggtggaatggaaa
tgggacggcatccgcgcacaactggtcaaacgtgacggcaggctgtggatctggtcacgg
ggcgaagagctggtcaccgaccgcttcccggaactgcacagcctggcgcaatgcctgccg
gacggcacggtgatcgacggcgaaatcgtggtctggaaagcgcctgacattaacccggac
atcagccacgacagcgatgcagcgttcgcgctggataatgacgccccgaacgctgcgccc
tcagtccagcccttcgccctgctgcaacaacgcatcggccgcaagacactgggcaagaag
atcctcactgacattccggtcgtggtgctggcctacgacctgctggaatggcaaggcgct
gactggcgcagccgcccgcaacacgaacgccgcacgcaactggaaaccttgatcgatagc
tgtcagagcgaggtgctgatgccctcgccggtgctcaccggcaaagactggctcgacctc
gccacccagcgcgaagcatcccgcagcctgggggtcgagggcatgatgctcaaggcccgc
gactcgctgtacggggtcggtcgcaccaaagacatgggcgtctggtggaagtggaaaatc
gacccgttcagcgtcgatgccgtgctgatctatgcgcaacgcggtcatgggcgacgcgcc
agtctgtacagcgattacacgtttgccgtgtgggacggcccgcccgaagcaagcgaacgc
acgctggtgccgttcgccaaagcctactcagggctgaccgacgaagaaatgcgcaaagtg
gacgcaattgtgcgcaagaccaccgtagagaagttcggcccggtgagcagtgtgacgccc
acattggtgttcgagctgggtttcgagggcatcgccttgtccaagcgtcacaagagcggc
atcgccgtacgcttcccgcgcatgctgcgttggcgacaggataaaccggtcgccgaggcc
gatagcctgacgacactgcaggacctgctgaactga
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