Pseudomonas syringae pv. tomato DC3000: PSPTO_4197
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Entry
PSPTO_4197 CDS
T00118
Name
(GenBank) conserved hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPTO_4197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_4197
Transporters [BR:
pst02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSPTO_4197
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AAO57653
UniProt:
Q87XI1
LinkDB
All DBs
Position
complement(4729025..4730221)
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AA seq
398 aa
AA seq
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MTITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHN
VDFVWPARAIQPIDTRRIALWHEINDLPKRGRLRPTDQPGSGSVPSERLFVQHDGSLGST
VTERISMLPLTHNADSFAYRPERLPEGLSPADESWGWLLDSAWGGRIALQSDAAIGALDA
ALAVQGAGLAQFNDIGNMSIEEIDLLADVLVRKQQQGHFGAFWSDDEEAAELMLSPTIDI
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRYAKGPVLDAAYAYLNWWLSGWP
GAVMARQGYYIGNPARSRDHLSAAEWDYWYAGLPAREQLLGSDGLPLIDAGEIRDGGSYE
ERMGHIAVWNSVMNEHNYLVRRWSDILRASGKSSAKAR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcactttacgtgtgctcggcacttcggtgaccttgctcgagtccttgcgcgag
cgagccgagcaggaactaggcatcaagctggtctaccagattcatgacgtgcagaccgcg
cagcgcatcgcggtcatgcagcctgacagctacgacctctatgatcagtggtttcacaac
gtcgatttcgtctggcctgcgcgggcgattcagcccatcgacacgcgtcgtattgcgctg
tggcatgagatcaacgacctgcccaagcgcggtcgtttacggcccactgatcaaccgggc
agcggcagcgtgcccagcgagcgcctgttcgtgcagcacgacggcagccttggcagcacg
gtgaccgagcgcatcagcatgttgccgttgacccacaacgctgacagttttgcctatcgc
cccgagcgcttgccggaaggtttgagccctgcggatgaaagctggggctggctgctggat
tcagcgtggggcgggcgtatcgcgttacaaagtgacgccgccatcggcgcgctggatgcc
gcactggcggtacagggcgcggggcttgcgcagttcaacgacatcggcaacatgagcatc
gaagaaatcgacctgctcgccgatgtgctggtgcgcaaacagcagcaagggcacttcggc
gcattctggtccgacgacgaagaagctgccgaactgatgctcagcccgaccattgatatc
cagagcctgtggtcaccgaccctggtcaggttgcaccgcgctggcgtgaaataccgtgtg
gcggtgcccaaagagggctatcgcggctggttcggcgggctgtccttgtcgcgctacgcc
aaagggccggtgctggatgcggcatatgcctacctgaactggtggctttcgggatggccg
ggtgcagtcatggcgcgacaggggtattacatcggcaatccggcacgcagccgtgaccat
ctgagcgccgccgaatgggactactggtacgcaggcttgcccgcccgcgaacaactgctc
ggcagcgacggcttgcccctgatcgacgccggagagatccgcgacggcggctcctacgaa
gaacgcatgggccacatcgccgtttggaactcggtcatgaacgaacacaactacctggta
cgccgctggagcgacatcctgcgcgccagcggcaaaagcagcgcgaaggctcgttag
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