KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_4217
Entry
PSPTO_4217        CDS       T00118                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pst00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PSPTO_4217 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pst03019]
    PSPTO_4217 (rnc)
   03009 Ribosome biogenesis [BR:pst03009]
    PSPTO_4217 (rnc)
   03036 Chromosome and associated proteins [BR:pst03036]
    PSPTO_4217 (rnc)
Enzymes [BR:pst01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PSPTO_4217 (rnc)
Messenger RNA biogenesis [BR:pst03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PSPTO_4217 (rnc)
Ribosome biogenesis [BR:pst03009]
 Eukaryotic type
  90S particles
   RNase
    PSPTO_4217 (rnc)
 Prokaryotic type
  rRNA processing factors
   PSPTO_4217 (rnc)
Chromosome and associated proteins [BR:pst03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PSPTO_4217 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase MmeI_N
Other DBs
NCBI-ProteinID: AAO57673
UniProt: Q87XG1
LinkDB
Position
complement(4750298..4750987)
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMILALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtatccctgagccgccttgagcgtcagctcggctacaccttcaaggatcaggaa
ctgatgatcctggccctgacccaccgcagttttgccggtcgcaacaacgagcgtctggag
tttctaggtgatgccatcctcaatttcgtggcgggcgaagcgttgttcgagcgcttccct
caggcccgcgaaggtcagttgtcccgtttgcgagcgcggctggtcaagggcgaaaccctg
gcgttgctggcgcgtggctttgatctgggcgagtacctgcgcctgggctccggcgagctg
aaaagcggtggcttccgtcgcgagtccattctggctgacgcccttgaggcgctgatcgga
gcgatctacctcgatgcaggcatggaagcggcgcgcgagcgtgtgctggcctggctgacg
accgagttcgacagcctgacgctggtggacaccaacaaggaccccaagacccgactgcag
gaatttctccagtcgcgggcctgcgacctgccgcgctacgaagtggtggatatccagggc
gagccgcattgccggacgtttttcgtcgaatgcgagatcaacctattgaatgaaaagagc
cgaggacagggtgtcagccgccggattgccgaacaggtagccgccgcagcagcactcatc
gccctgggcgtggagaacggtcatgaatga

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