KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_4292
Entry
PSPTO_4292        CDS       T00118                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator/response regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSPTO_4292
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pst02022]
    PSPTO_4292
Two-component system [BR:pst02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PSPTO_4292
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA AAA_2 MDMPI_N MCM
Other DBs
NCBI-ProteinID: AAO57743
UniProt: Q87X96
LinkDB
Position
4835207..4836541
AA seq 444 aa
MLNSVIVVDDEAPIRQAVEQWLTLSGFEVQVFARAEECLAQMPEHFPGVVLTDVRMPGMT
GLQLLTHLHALDRDLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPETLISNLRRALEK
RQLVLENRRLHEQADARTRLDATLLGVSPSLQTLRRQVLELSQLPVNVIIRGETGSGKEL
VARCLHDFGPRAGKPFVALNCAAIPEYLFEAELFGHESGAFTGAQGKRIGRLEYADGGTV
FLDEIESMPLAQQVKLLRVLQDKCLERLGSNQSIKVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLPALRDRLEDIAQLFSHFSRAAAERMGREAPALSAARLNQLLSHDWPGN
VRELANAAERQTLGLEMTPPQADTQLPGHSLAARQEAFEAQCLRASLTRHKGDIKAVLNE
LQLPRRTLNEKMQRHALVREMFLG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgctgaactcggtcatcgtggtagacgacgaggcacctatccggcaagccgtcgaacaa
tggctgacgctgtcaggttttgaggtgcaggtcttcgcccgcgccgaagagtgcctggcg
cagatgccggagcatttcccgggcgtggtgctgaccgatgtgcgcatgccgggcatgacc
ggcctgcaattgctgacccacctgcacgcccttgaccgggacctgcccgtcattctgctg
accggccacggcgatgtgcccatggcagtagaggccatgcgcgaaggtgcctatgatttt
ctggaaaagccattcagcccggaaacgttgatcagcaacctgcggcgagcgctggaaaaa
cgccaactggtactggaaaaccgtcgcctgcatgaacaggccgacgccagaacccggctg
gatgccaccctgctcggcgtatccccaagcctgcagaccctgcggcgccaggtgctggag
ctgtcgcaactgcctgtcaacgtgatcattcgtggtgaaaccggcagcggcaaagagctg
gtggctcgctgccttcacgacttcggcccacgcgccggcaaacccttcgtggcactcaac
tgtgccgccatcccggaatacctgttcgaggccgagctgttcgggcacgaaagtggcgca
tttaccggcgcgcagggtaaacgtatcgggcggctggaatacgccgacggcggtacggtg
tttctcgatgaaatagagagcatgcccttggcgcaacaggtcaagctgctgcgcgtcctg
caggacaagtgccttgaaaggctgggctccaaccagagcatcaaggttgacctgcggatc
attgcggcgaccaaaccggacctgctcgaagaagctcgcgccgggcgcttccgcgaggac
ctggcctaccgactgaacgttgccgagctgcgcttgcctgcgctgcgcgaccggcttgag
gacattgcgcaactgttcagccatttcagcagggccgccgccgagcgtatgggacgtgag
gcccccgccctgagcgccgcgcgcctgaaccagctgctcagccacgactggcccggcaat
gtgcgcgaactcgccaatgcggccgagcggcagaccctgggcctggaaatgacgccaccg
caagccgacactcaactaccaggacattcactggcggcacgtcaggaagccttcgaagcg
caatgcctgcgcgcctcattgacccgccacaaaggcgatatcaaggctgtgctcaacgag
ttgcaattgccccggaggacgctgaacgagaaaatgcagcgtcatgccctggtgcgggaa
atgtttctcggctga

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