Pseudomonas syringae pv. tomato DC3000: PSPTO_4376
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Entry
PSPTO_4376 CDS
T00118
Symbol
groEL
Name
(GenBank) chaperonin, 60 kDa
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPTO_4376 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pst03019
]
PSPTO_4376 (groEL)
03110 Chaperones and folding catalysts [BR:
pst03110
]
PSPTO_4376 (groEL)
03029 Mitochondrial biogenesis [BR:
pst03029
]
PSPTO_4376 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pst04147
]
PSPTO_4376 (groEL)
Enzymes [BR:
pst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSPTO_4376 (groEL)
Messenger RNA biogenesis [BR:
pst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSPTO_4376 (groEL)
Chaperones and folding catalysts [BR:
pst03110
]
Heat shock proteins
HSP60 / Chaperonin
PSPTO_4376 (groEL)
Mitochondrial biogenesis [BR:
pst03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSPTO_4376 (groEL)
Exosome [BR:
pst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSPTO_4376 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PSPTO_4376 (groEL)
Exosomal proteins of breast cancer cells
PSPTO_4376 (groEL)
Exosomal proteins of colorectal cancer cells
PSPTO_4376 (groEL)
Exosomal proteins of bladder cancer cells
PSPTO_4376 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAO57826
UniProt:
Q87X14
LinkDB
All DBs
Position
complement(4938343..4939986)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDAGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLETTTLEHLGNAKRVILNKENTTIIDGAGVKTDIDSRISQIRQQIGDTSSDY
DKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAIEGLKGDNADQDVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ASGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIADVADEKAAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaagttcggcgatgctggccgtaaaaaaatgctcgccggtgta
aacgtcctggctgacgcagtaaaagcgaccctgggcccaaaaggccgtaacgttatcatc
gaaaaaagctttggcgctccgctgatcaccaaagacggtgtgtcggttgccaaggaaatc
gagcttaaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgatgcgggtgatggtactactaccgctaccgtactggctcaggccatcgtc
aacgaaggcctgaaagctgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgctatcgttgcagagctgaaaaagctgtccaagccttgcaccgac
accaaggcaattgcccaggtcggcaccatttcggccaactctgatcactccatcggcgac
atcattgccgaagccatggaaaaagtgaccaaagacggcgttatcaccgttgaagaaggt
tcgggcctggaaaacgagctgtctgttgtagaaggcatgcagtttgaccgcggttacctg
tccccgtacttcatcaacaagccggacaccatggtcgccgagctcgacagcccgctgctg
ttgctggtcgacaagaagatctccaacattcgcgaaatgctgccggttctggaagcagtc
gccaaggctggccgtcctctgctgatcgttgctgaagacgttgaaggcgaagcgctggca
actctggttgtcaacaacatgcgcggtatcgtgaaagttgcagccgtcaaggctccaggt
ttcggcgaccgtcgcaaggccatgctgcaggacatcgctgttctgactggcggtaccgtc
atctccgaagagatcggtctgagcctggaaaccactaccctggaacacctgggtaatgcc
aagcgcgtcatcctgaacaaagaaaacaccaccatcattgatggtgctggcgtcaaaacc
gatatcgactcgcgtatctcccagatccgtcagcaaatcggcgacaccagctcggactac
gacaaggaaaaactgcaggagcgtctggccaagctgtctggcggcgttgcagtgatcaag
gtcggtgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgtgcagcggtcgaagaaggcgtggtacctggcggtggcgtagcactggtt
cgctcgctgcaggccatcgaaggtctgaaaggcgacaacgccgatcaggacgtcggtatt
gctctgctgcgtcgcgcagtcgaagcgcctctgcgccagatcgttgccaactccggtgac
gagccaagcgttgtggtcgacaaggtcaagcagggttcgggtaacttcggttacaacgct
gcttccggcgaatacggcgacatgattgaaatgggtatcctcgacccggccaaagtgact
cgctctgctctgcaggccgcgtcctccatcgccagcctgatgatcaccaccgaagcgatg
atcgctgacgtggctgatgaaaaggcagcaggcggcggcatgccggacatgggcggcatg
ggtggtatgggcggcatgatgtaa
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