Pseudomonas syringae pv. tomato DC3000: PSPTO_4410
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Entry
PSPTO_4410 CDS
T00118
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00470
D-Amino acid metabolism
pst00550
Peptidoglycan biosynthesis
pst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSPTO_4410 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSPTO_4410 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4410 (murD)
Enzymes [BR:
pst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PSPTO_4410 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Precursor biosynthesis
Amino acid ligase
PSPTO_4410 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AAO57859
UniProt:
Q87WY3
LinkDB
All DBs
Position
complement(4977421..4978767)
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AA seq
448 aa
AA seq
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MSLIVSDRFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVDFLCRADELYVSPGLALATPALQQAHARGAKLSGDIELFARYAKAPVIAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLIGEGLPCWTFGLNKPD
FHGFGLREENGEKFLAFQFENLMPVSELKVRGAHNQANALAALALGHAVGLPFDAMLSSL
REFTGLEHRCQWLRERNGVDYYNDSKATNVGAALAAIEGLGSDIGGKLVLIAGGDGKGAD
FSGLRAPVAKYCRAAVLLGRDAELIAQALGDAVPLIRVDTVQAAAERSAELAQRGDAVLL
SPACASLDMFKNYEERGRVFAQAVECLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgtttccgaccgcttccgcattgttgtggggcttggcaagagtggcatg
tccctggttcgcttcctggcgaaccggggcgtgtcctttgctgtggccgacacgcgggaa
aatcctcctgagctggcgactttgcgtcgtgactatcctcaggtggaagtgcggtgtggc
gaactggacgtggacttcctctgccgtgccgacgagctttatgtcagccctggtctggcc
ctggccacaccggccttgcagcaggcgcatgcacgcggcgccaagctgtccggcgacatc
gaactgtttgcccgttacgccaaggcaccggtgattgcgattaccggttccaacgcgaaa
agcaccgtgaccacgctggtcggcgagatggccgcagctgccggcaagcgtgttgctgtg
ggcggcaacctgggcaccccggcgctggacctgctcagcgatgatgtcgagttgtacgtg
atggaattgtccagttttcagctcgaaaccactgatcagctcaatgccgaagtggcgacc
gtgctgaacatcagcgaagaccatatggaccgttattccggtctgccggcctatcacctc
gccaagcaccgtattttccgtggcgcgcggcaagtagtggtcaatcggcaggacgcgctg
tcccgtccgttgatcggcgaaggcctgccttgctggacgttcggcctcaacaagcctgac
ttccacggctttggtctgcgtgaagagaacggcgaaaaattcctggcattccagttcgag
aacctgatgccggtgagcgagctgaaagttcgcggcgcacacaatcaggctaacgcactg
gcagccctggcgctggggcatgccgtgggcctgccgttcgacgccatgctttccagcctg
cgtgagttcaccggccttgagcaccgctgccaatggctgcgtgagcgcaatggcgtggac
tactacaacgattccaaggccaccaacgtgggtgctgcactggccgctatcgaaggcctg
ggctcggatatcggcggcaagctggtgttgatcgccggtggcgatggcaaaggtgccgac
ttcagcggcctgcgtgcccccgtggctaaatactgccgcgctgcggtgttgctgggtcgc
gatgccgagctgattgcccaggcgctgggtgatgccgtgccgctgattcgtgtcgacacg
gttcaggcggctgccgagcgcagcgccgagctggctcagcgcggcgatgccgtgttgctt
tcccctgcatgcgccagtctggacatgttcaagaattatgaagagcgcggacgtgtgttc
gcgcaggcagtggagtgcttgtcatga
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