Pseudomonas syringae pv. tomato DC3000: PSPTO_4456
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Entry
PSPTO_4456 CDS
T00118
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pst03019
]
PSPTO_4456
Messenger RNA biogenesis [BR:
pst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSPTO_4456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
AAA_16
T2SSE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAO57905
UniProt:
Q87WT7
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All DBs
Position
5019584..5020441
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AA seq
285 aa
AA seq
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MRMIIVSGRSGSGKSTALDVLEDNGFYCVDNLPAGLLPELAERALINTELAEPLLAVSID
ARNLPSHLTRFPQMLDEVRSRNIQCDVLYLDADEATLLKRFSETRRRHPLSTADRSLAEA
IRDETTLLGPIIDLADLKINTTHLNLYQLRDALKLRLLNKPEPGTAFLIESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLSAQADVEEMFQDIFSYLNKWLPRFAA
SNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgatcatcgtcagcggccgctccggctcaggcaagagtacggcgctcgatgtg
ctggaagacaacggtttctattgcgtcgacaacctgccagccggcctgctgccggaactg
gccgagcgcgcgctgatcaacaccgaactggctgaaccgctgctggcagtttccatcgat
gcacgcaatctgcccagccacctcacacgcttcccgcagatgctggatgaagtgcgctca
cgcaatatccaatgcgacgtgctttacctggacgccgacgaagccaccctgctcaagcgt
ttctcggaaacccgacgtcgccacccgctgagcacagcggaccgctcgctggctgaggcg
atacgggacgagaccaccctgctcggcccgatcatcgacctggccgatctgaaaatcaac
accactcacctgaacctgtaccagctgcgtgacgctctgaaactgcgcctgctgaacaag
cccgagccgggtacggctttcctgatcgagtcgttcggcttcaagcgtggcatgcctgtc
gatgcagacctggtatttgacgtgcgttgcctgcccaacccttattggaagcctgagctg
cgcgaccattcgggcctggaacaaccggttatcgactacctgtccgcgcaggccgatgta
gaagagatgttccaggatatcttctcctacctcaataaatggctgccgcgctttgcagcc
agcaaccgctcttacgttaccattgccatcggttgcaccggcgggcatcaccgctccgtc
tacctgaccgaacggcttggccaggtcttgcaacaatcactcaagaacgttcaggtccgc
caccgcgaccttagctga
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