Pseudomonas syringae pv. tomato DC3000: PSPTO_4475
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Entry
PSPTO_4475 CDS
T00118
Symbol
gatB
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase, B subunit
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00970
Aminoacyl-tRNA biosynthesis
pst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSPTO_4475 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pst03029
]
PSPTO_4475 (gatB)
Enzymes [BR:
pst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
PSPTO_4475 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
PSPTO_4475 (gatB)
Mitochondrial biogenesis [BR:
pst03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PSPTO_4475 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AAO57924
UniProt:
Q87WR8
LinkDB
All DBs
Position
5039359..5040804
Genome browser
AA seq
481 aa
AA seq
DB search
MQWEVVIGLEIHTQLSTQSKIFSGSATTFGSEPNTQACLVDLGMPGVLPVLNKEAVRMAV
KFGLAVDAEIGQHNVFARKNYFYPDLPKGYQISQMELPIVGKGHLDIPLEDGTVKRVGIT
RAHLEEDAGKSLHEDFQGMTGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKAIHAIVRYL
GICDGNMAEGSLRCDCNVSIRPKGQVEFGTRCEIKNVNSFRFIEKAINSEIQRQIDLIED
GGKVIQQTRLYDPNTNETRAMRSKEEANDYRYFPDPDLLPVIIEDSFIEETRATLPELPP
QKRERFQSQFGLSTYDASVLASSREQADYFEKVVSISGDAKLAANWVMVELGSLLNKQGV
EIDQSPVSAEQLGGMLKRITDNTISGKIAKMVFEAMANGEGSADEVIEKRGLKQVTDSGA
IESMLDEVLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPQQVNELLKAKLE
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggaagtcgtcatcgggcttgagattcacactcagctttcgacccaatcaaag
attttttccggcagcgccaccacgttcggctccgagcccaacacccaggcctgccttgtc
gatctgggcatgccgggcgtgctgccagtgctgaacaaggaagccgtgcgcatggccgtc
aagttcggcctggcggtagatgccgaaatcggtcagcacaacgtgttcgcccgcaaaaac
tatttttacccggacctgcccaagggctatcagatcagccagatggagctgccgattgtc
ggcaagggccacctggacattcccctggaggacggcacggtcaaacgcgtcggcatcact
cgcgcgcaccttgaagaagacgctggcaaaagtctgcatgaagacttccagggcatgacc
gggatcgacctgaaccgtgccggcacgccgctgctggagatcgtttccgagccggacatg
cgcagcgcaaaagaagccgtggcctacgtcaaggccatccacgcgatcgttcgctacctg
ggtatctgcgacggcaacatggccgagggctcgctgcgttgcgactgcaacgtgtcgatc
cgccccaagggccaggtcgagttcggtactcgctgcgagatcaagaacgtcaactcgttt
cgcttcatcgaaaaagcgatcaacagcgagattcagcgccagatcgacctgatcgaagac
ggcggcaaggttatccagcagacacgtctgtacgacccgaacaccaacgaaacccgcgcc
atgcgcagcaaggaagaagccaacgactaccgttacttccctgacccagacctgttgccg
gtgatcatcgaagactcgttcatcgaagaaacccgcgccacactgccggaactgccaccg
cagaaacgcgaacgcttccagagccagttcggcctgtcgacgtacgacgccagcgtgctg
gcctccagccgcgagcaggccgactactttgaaaaagtggtcagcatcagcggcgacgcc
aagctggccgccaactgggtcatggtcgaactgggcagcctgttgaacaaacagggggtc
gaaatcgaccagtcgccggtcagcgccgaacaactgggcggcatgctcaagcgcatcact
gacaacaccatttcgggcaagatcgccaaaatggtttttgaagcgatggccaatggtgaa
ggcagcgccgatgaagtgatcgagaagcgcggcctgaaacaggtgaccgacagcggtgcc
atcgaatcgatgctcgacgaagtactggctgccaacgcagaacaggtcgaacagtaccgt
gcagctgatgaagccaagcgcggcaagatgttcggtttcttcgtcggccaggccatgaaa
gcctccaaaggcaaggccaacccacagcaggtcaacgaactgctgaaggccaaactggag
ggttaa
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