Pseudomonas syringae pv. tomato DC3000: PSPTO_4476
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Entry
PSPTO_4476 CDS
T00118
Name
(GenBank) rplA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4476
Enzymes [BR:
pst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSPTO_4476
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSPTO_4476
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Gene cluster
GFIT
Motif
Pfam:
DPBB_1
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AAO57925
UniProt:
Q87WR7
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All DBs
Position
5040903..5041271
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AA seq
122 aa
AA seq
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MRRLLLASSLLTLLAGCANHVIDPHGYDETGTAAYYGTRHHGNRTASGEPFNQNALTAAH
RQLPFGTRVKVTNLNNDKSVIVRVNDRGPHTRGRLIDVSREAAEQLGMLRSGTAPVRVQA
LD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgacttcttcttgccagcagcctgctgaccttgctggctggctgcgccaatcac
gtcattgacccacacggttatgacgaaaccggtactgccgcttattacggtacccgccat
catggcaatcgcaccgccagcggcgaaccgttcaatcagaacgccctgaccgctgcccac
cggcagttgccattcggcacgcgcgtcaaagtcaccaacctgaacaacgacaaatcagtg
atcgtgcgtgtcaatgatcgtggcccgcacacacggggtcgtctgatcgatgtctctcgc
gaagcagccgaacaactgggtatgctgcgcagcggcaccgcgccagttcgcgttcaagcc
ctcgactaa
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