Pseudomonas syringae pv. tomato DC3000: PSPTO_4488
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Entry
PSPTO_4488 CDS
T00118
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pst03016
]
PSPTO_4488 (truB)
Enzymes [BR:
pst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSPTO_4488 (truB)
Transfer RNA biogenesis [BR:
pst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPTO_4488 (truB)
Prokaryotic type
PSPTO_4488 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ABK79686
UniProt:
A0PCI9
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All DBs
Position
complement(5055111..5056028)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTGDSEGDVLLTRPVTVGRDDIEAVLPDFRGKIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGETARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgtcgcaatgtcagcgggatcatcctgctcgacaagcca
ctgggcttcacgtccaacgccgctctgcaaaaggttcgctggctgctcaatgccgagaag
gcggggcacacgggcagccttgatcctttggccaccggcgttctgccgttgtgctttggc
gaggcgaccaagttctctcagtatctgctcgattcggacaagtcctacgagacgctggcc
caactgggcaagaccacgaccactggcgactccgagggcgatgttttgctcacgcgtccg
gtgaccgttggtcgcgacgatatcgaagcggttctgcccgactttcgcgggaaaatcagc
cagatacctcccatgtactcggccctcaagcgtgacgggcagccactttacaaactggcg
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgcgaaggcgagacagcacgtctgtcggtggattgcagtaaaggcacctatatc
cgcacgctggtcgaggatatcggtgaaaaactcggttgtggtgcctacgtcgcagaactg
cgccgtacccaggccgggcctttcacgctggctcagacggttacgctggaagagctcgag
caagtgcacgccgacggtggcaacgaagcggttgaccgcttcctgatgccttcggacagc
ggcctgctggactggccgttgctgaagttttccgagcacagttcgttttactggttgcat
ggtcagccggtacgcgccccggacgcaccgaaattcggtatggtgcgggtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcagcgaagacgggcgtattgcgccgcgtcga
ttgattcggtcagagtga
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