KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_4488
Entry
PSPTO_4488        CDS       T00118                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:pst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pst03016]
    PSPTO_4488 (truB)
Enzymes [BR:pst01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PSPTO_4488 (truB)
Transfer RNA biogenesis [BR:pst03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PSPTO_4488 (truB)
 Prokaryotic type
    PSPTO_4488 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3
Other DBs
NCBI-ProteinID: ABK79686
UniProt: A0PCI9
LinkDB
Position
complement(5055111..5056028)
AA seq 305 aa
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTGDSEGDVLLTRPVTVGRDDIEAVLPDFRGKIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGETARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq 918 nt   +upstreamnt  +downstreamnt
gtggctcaggtcaagcgtatacgtcgcaatgtcagcgggatcatcctgctcgacaagcca
ctgggcttcacgtccaacgccgctctgcaaaaggttcgctggctgctcaatgccgagaag
gcggggcacacgggcagccttgatcctttggccaccggcgttctgccgttgtgctttggc
gaggcgaccaagttctctcagtatctgctcgattcggacaagtcctacgagacgctggcc
caactgggcaagaccacgaccactggcgactccgagggcgatgttttgctcacgcgtccg
gtgaccgttggtcgcgacgatatcgaagcggttctgcccgactttcgcgggaaaatcagc
cagatacctcccatgtactcggccctcaagcgtgacgggcagccactttacaaactggcg
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgcgaaggcgagacagcacgtctgtcggtggattgcagtaaaggcacctatatc
cgcacgctggtcgaggatatcggtgaaaaactcggttgtggtgcctacgtcgcagaactg
cgccgtacccaggccgggcctttcacgctggctcagacggttacgctggaagagctcgag
caagtgcacgccgacggtggcaacgaagcggttgaccgcttcctgatgccttcggacagc
ggcctgctggactggccgttgctgaagttttccgagcacagttcgttttactggttgcat
ggtcagccggtacgcgccccggacgcaccgaaattcggtatggtgcgggtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcagcgaagacgggcgtattgcgccgcgtcga
ttgattcggtcagagtga

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