Pseudomonas syringae pv. tomato DC3000: PSPTO_4572
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Entry
PSPTO_4572 CDS
T00118
Name
(GenBank) pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00330
Arginine and proline metabolism
pst00480
Glutathione metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PSPTO_4572
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PSPTO_4572
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PSPTO_4572
Enzymes [BR:
pst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PSPTO_4572
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AAO58018
UniProt:
Q87WH8
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All DBs
Position
complement(5167536..5168615)
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AA seq
359 aa
AA seq
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MVIDTAIISKAYDDLRAGFDFAKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVLS
CGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVRILTEGS
TTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKVKVIF
ERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILEPGRS
LISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGEMEEV
VIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFPPLKSFYL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattgataccgccatcatcagcaaggcctatgacgacctgcgtgcgggcttcgat
ttcgccaaggtttactacgccgtcaaagccaacccggccgttgaagtcatcaatctgctc
aaggacaagggttcgagcttcgacatcgcttcgatctacgaactggacaaggtcctgagt
tgcggcgttggccctgagcgtatgagctatggcaacaccatcaagaaatccaaggacatc
cgctacttctacgagaagggcgtgcgtctgtttgcaaccgattccgaagctgatctgcgc
aacattgccaaggctgcaccgggcgcgaaagtctatgtgcgcatcctgaccgaaggctcg
accactgccgactggcctctgtcgcgcaaattcggctgccagaccgacatggccatggac
ctgctgattcttgcccgtgacctgggcctggtaccttacggcatctcgttccacgttggc
tcgcagcagcgcgacatcagcgtctgggacgctgccatcgccaaggtcaaagtgattttc
gagcgcctgaaagaagaagacggcatcgttctgaagctgatcaacatgggtggcggcttc
ccggccaactacatcacccgtaccaacagcctggaaacctacgctgaagaaatcatccgc
tttctgaaggaagacttcggtgatgacctgccggaaatcattctggagccaggccgttcg
ctgatctccaatgccggtattctggtcagcgaagtcgtgctggtcgcgcgcaagtcgcgc
accgccgtcgagcgttgggtctacaccgacgtgggcaaattctccggcctgatcgaaacc
atggacgaagccatcaagtttccgatctggaccgaaaaaaaaggcgagatggaagaagtg
gtcattgccggcccgacctgcgacagcgccgacatcatgtacgagaactacaagtatggc
ctgccgctcaacctggccatcggtgaccgtatgtactggctgtcgaccggcgcctacact
accagctacagcgcggtggagttcaacggcttcccgccgctgaaatcgttctacctgtaa
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