Pseudomonas syringae pv. tomato DC3000: PSPTO_4579
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Entry
PSPTO_4579 CDS
T00118
Symbol
prfC
Name
(GenBank) peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pst03012
]
PSPTO_4579 (prfC)
Translation factors [BR:
pst03012
]
Prokaryotic type
Release factors
PSPTO_4579 (prfC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AAO58025
UniProt:
Q87WH1
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Position
5175451..5177034
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AA seq
527 aa
AA seq
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MTQQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAISVAGTVKSRKSDRHATSDWMEM
EKQRGISITTSVMQFPYRDHMINLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPR
TIALMDVCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGV
YHLADDYIIVYTAGHGHERTDTKIIQNLDSDEARAHLGDEYDRFVEQLELVQGACHEFNQ
QEFIDGQLTPVFFGTALGNFGVDHVLDAVVNWAPMPLARVANERTVEPEEEKFAGFVFKI
QANMDPKHRDRIAFMRICSGRYEKGMKMRHVRLGKDVRIGDALTFFSSEREQLEEAYAGD
IIGLHNHGTIQIGDTFTEGEALGFTGIPHFAPELFRRVRLKDPLKSKQLRQGLQQLAEEG
ATQVFFPQRSNDIILGAVGVLQFDVVASRLKEEYKVECAYEPITVWSARWIDCADKKKLE
EFENKAVENLAVDGGGHLTYLAPTRVNLALMEERWPDVKFSATREHH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacaggccgccgaagtcgcgaaacgccgcactttcgccattatttcccacccg
gatgcgggtaaaaccaccatcacggaaaaactcctgctgatgggcaaggccatttccgtc
gccggtacggtcaagtcgcgtaaatccgaccgccacgccacctccgactggatggaaatg
gagaaacagcgcggtatctccatcaccacgtcggtgatgcagttcccgtatcgcgatcac
atgatcaacctgctcgacaccccgggtcacgaagacttctccgaagacacctaccgtacc
ctgacggccgtcgactcggccttgatggtgctcgacggcggtaaaggcgtcgagccacgt
accattgccctgatggatgtctgccgcctgcgtgacacgccgatcgtcagcttcatcaac
aagctggaccgcgacattcgcgacccgatcgaactgctcgacgaaatcgaagcggtcctc
aagatcaaggctgcgccgattacctggccaattggctgctaccgtgacttcaagggtgtc
tatcacctggctgacgactacatcattgtttacaccgcaggccacggtcacgaacgcacc
gacaccaaaatcatccagaatctggactccgacgaagcccgcgcccacctgggtgacgag
tacgaccgcttcgtagagcaactggaactggtgcagggcgcttgccacgaattcaatcag
caggagttcatcgacggccaactgaccccggtgttcttcgggacggctttgggcaacttc
ggcgtcgatcacgtgcttgatgctgtggtgaactgggcgccgatgccgctggcacgggtt
gccaacgagcgcaccgtcgagccggaagaagaaaaattcgccggtttcgtgttcaagatt
caggcgaacatggaccccaagcaccgcgaccgtattgcgttcatgcgcatttgctcgggg
cgctacgagaaaggcatgaaaatgcgccacgtgcgcctgggcaaggacgtgcgaatcggc
gacgcgctgaccttcttctcctcggagcgtgagcaactcgaagaagcctacgctggcgac
atcatcggcctgcacaaccacggcaccatccagatcggcgacaccttcaccgaaggcgaa
gcgctgggcttcacgggtattccgcactttgccccggagctgttccgccgcgtgcgtctg
aaagacccgctcaagtccaagcaactgcgccagggcctgcaacagctcgccgaagaaggc
gccacgcaggtgttcttcccgcagcgcagcaacgacatcattctcggcgccgtcggtgtg
ctgcagttcgacgtggtcgccagccgcctgaaggaggaatacaaggtcgaatgcgcctac
gagccgatcaccgtctggtcggcccgctggatcgactgcgctgacaaaaagaagcttgaa
gagtttgagaacaaggccgtggaaaacctggcagtggacggcggcggtcacctgacctac
ctcgcccctacccgcgtgaacctggcgctgatggaagaacgctggcccgacgtgaaattc
agcgccacccgcgagcaccattga
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