Pseudomonas syringae pv. tomato DC3000: PSPTO_4632
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Entry
PSPTO_4632 CDS
T00118
Symbol
glyA-2
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00260
Glycine, serine and threonine metabolism
pst00460
Cyanoamino acid metabolism
pst00630
Glyoxylate and dicarboxylate metabolism
pst00670
One carbon pool by folate
pst00680
Methane metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01120
Microbial metabolism in diverse environments
pst01200
Carbon metabolism
pst01230
Biosynthesis of amino acids
pst01240
Biosynthesis of cofactors
pst04981
Folate transport and metabolism
Module
pst_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSPTO_4632 (glyA-2)
09102 Energy metabolism
00680 Methane metabolism
PSPTO_4632 (glyA-2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSPTO_4632 (glyA-2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSPTO_4632 (glyA-2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSPTO_4632 (glyA-2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSPTO_4632 (glyA-2)
Enzymes [BR:
pst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSPTO_4632 (glyA-2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AAO58078
UniProt:
Q87WC1
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All DBs
Position
5234654..5235907
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGMIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGSQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKETECKELAGWICDILADLNNEAVIDAVREKVKAICAKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactatcgccaagtacgacgccgatctgtttgccgccatggag
caagaagctctgcgtcaggaagaacatatcgagctgatcgcctcggaaaactacaccagt
ccggccgtcatggaagctcaaggctcggtactgaccaacaagtacgctgaaggctaccca
ggcaagcgttattacggtggctgcgagtacgtcgacgttgtcgagcaactggctatcgac
cgtgccaaagagctgttcggcgccgactacgccaacgtccagccacacgccggttcgcaa
gccaactcggcggtctacctggctctgctgcaaggcggcgacaccattctgggcatgagc
ctggctcacggcggtcacttgacccacggtgccagcgtgtcctcctcgggcaagctgtac
aacgctgttcagtacggcatcgacggcaacggcatgatcgactacgacgaagtcgagcgc
ctggctgttgaacacaagccaaaaatgatcgttgccgggttctctgcctactcgcagatc
ctcgacttcccgcgcttccgtgccattgccgacaaggtcggtgcctacctgttcgtcgac
atggcgcacgtagccggtctggttgccgcaggtgtctacccgaacccggtgccgttcgcc
gacgtcgtcaccaccaccacgcacaagaccttgcgcggtccacgtggcggtctgatcctg
gctcgcgccaacgccgacatcgagaagaagctcaactccgccgtattccctggctcccag
ggcggtccgctggagcacgtcatcgcagccaaggccatctgcttcaaggaagcgttgcag
cctgagttcaagacctaccagcaacaagtggtcaagaacgccaaggcaatggccggcgtg
ttcatcgagcgcggtttcgacgtggtgtccggcggtactgaaaaccacctgttcctgctc
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgcattgggtcgcgccttc
atcaccgtcaacaagaactcggtacccaacgacccacgctccccgttcgtcacctccggc
ctgcgcttcggcaccccggcagtgaccactcgcggcttcaaggaaacagagtgcaaagaa
ctggccggctggatctgcgacatcctggcggacctgaacaacgaagccgtgatcgacgct
gtccgtgagaaggtcaaggccatctgcgcgaagctgccggtttacggcgcttga
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