KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_4654
Entry
PSPTO_4654        CDS       T00118                                 
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:pst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pst03016]
    PSPTO_4654 (trmA)
Enzymes [BR:pst01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     PSPTO_4654 (trmA)
Transfer RNA biogenesis [BR:pst03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    PSPTO_4654 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Methyltransf_12 Cons_hypoth95 Methyltransf_15 RrnaAD TRM5-TYW2_MTfase DREV Ubie_methyltran DUF3410 PrmA
Other DBs
NCBI-ProteinID: AAO58100
UniProt: Q87WA0
LinkDB
Position
5257608..5258693
AA seq 361 aa
MSVPFDPASYDRQLEEKTARLRELLAPFDAPEPQVFDSPREHYRLRAEFRLWREDQKRYY
AMFAPGDNKTPILLEGLPIASQRINALMPVLRERWEASPTLNHKLFQVDFLTTLAGDAMI
TMCYHRPLDDEWLAAAEQLAVELDVSLIGRSKGQKLIIGHDYVTEKLDVAGRTFSYRQPE
GAFTQPNGTVNGKMLNWAFDALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTSV
NAALSNLDDNGVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYDFGSVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAANIAQLYDTHRIERCALFDQFPYTHHMESGVLLVR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgttcctttcgaccctgcgagctacgaccgtcagctcgaagaaaaaaccgcccgc
ctgcgcgagttgctggcaccgttcgacgcgcccgagccgcaggtgtttgattcaccgcgc
gagcattaccggctgcgcgccgagtttcgcttgtggcgcgaagaccagaagcgctattac
gcgatgttcgcgccgggcgacaacaagacgccgatcctgctcgaaggcctgccgattgcc
agccagcgcatcaacgcactgatgccggtgctgcgcgagcgttgggaagccagcccgacg
ttgaaccacaagctgttccaggtggattttctgaccacactggcgggcgatgccatgatc
acaatgtgctatcaccggccgctggacgatgagtggctagccgctgccgagcaattggct
gtcgagctggatgtaagcctgattggccgttccaaaggtcagaagttgatcatcggccat
gactacgtgaccgagaagctcgacgtggctggccgcaccttcagctatcgccagccagaa
ggcgcgttcacccagcccaacggcaccgtgaacggcaagatgctcaactgggcctttgat
gcactgggcgagcgtcaagacgacctgctggaattgtattgcggcaacggcaacttcacc
ttgccgctggccacccgcgtgcgcaaggtgctggcgaccgagatcagcaagacctcggtc
aacgctgcactgagcaatctggatgacaacggcgtggacaacgtcacgctggtgcgcctg
tcggccgaagaattgaccgaggcactgaacgaagtgcgcccgttccgccgtctgcagggc
atagacctgaaaagctacgatttcggcagcgtcttcgtcgatccgcctcgcgccggcatg
gacccggacacctgcgaactgacccgccgcttcgagcgcattctgtacatctcctgcaac
cccgaaaccctcgccgccaacatcgcccaactgtacgacacccaccggatcgaacgctgc
gccctgttcgaccagtttccgtatacccaccatatggagtcgggggtgttgctggtcagg
cgttga

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