Pseudomonas syringae pv. tomato DC3000: PSPTO_4665
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Entry
PSPTO_4665 CDS
T00118
Name
(GenBank) exonuclease, putative
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_4665
03430 Mismatch repair
PSPTO_4665
03440 Homologous recombination
PSPTO_4665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_4665
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_4665
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_4665
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPTO_4665
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPTO_4665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAO58111
UniProt:
Q87W89
LinkDB
All DBs
Position
complement(5269194..5269808)
Genome browser
AA seq
204 aa
AA seq
DB search
MLERVAVIDFETTGISPNPGCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRKREQSFACSMLL
ARRLMPGAPNHKLGTLTSYARLPNTGKAHRAIADAEMAANLTAYLTNELRNTHGIAGISH
QMLCSLQKVPAAKIGETLKRQRGF
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgttggaacgtgttgcagtcatcgactttgaaaccaccggaatctcgccgaaccccggt
tgccgggcgaccgagattgccgtggtcatcatggagcaggggcgtatcgtcgagcgcttt
cagagcctgatgaacgctggcgtgcgcattccggcgttcatcgaagggctgaccggtatc
agcaataacatgattcgcaccgcccccagcgccgagcgggtgatgggtgatgtggcggac
ttcgtcggctcgacgccgctggtggcgcacaacgcctcgtttgaccagaagttctgggat
tacgaactgtcgcgcatccagcgcaagcgcgaacaaagctttgcctgttcgatgctgctg
gcccgacgcctgatgcccggcgccccgaatcacaagctcggcacattgactagctatgcg
cgcctgcccaacaccggcaaggctcaccgggcgattgccgatgcggaaatggccgccaac
ctgacggcgtacctgaccaacgaactgcgcaacacccacggcatcgccgggatctcccac
cagatgctgtgctcgctgcaaaaagtcccggccgcaaaaatcggcgaaacgctcaagcgt
cagcgcggcttctga
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