Pseudomonas syringae pv. tomato DC3000: PSPTO_4776
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Entry
PSPTO_4776 CDS
T00118
Symbol
hopI1
Name
(GenBank) type III effector HopI1
Organism
pst
Pseudomonas syringae pv. tomato DC3000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DnaJ
Motif
Other DBs
NCBI-ProteinID:
AAO58206
UniProt:
Q87W07
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Position
complement(5416707..5418173)
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AA seq
488 aa
AA seq
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MINLTHIASSLARAALSDSTKPKMERAINVASHIAGKVALQVTSSLLEQKGLLNERQQKG
LSMILKALSGKEPVNNVETHEGGGRFNLARAAFDVASVVWERDKSMHNVMSFLGVSDSKG
KMLFSLGKKLADAMAKPEPGKDNSEATNARHAYFSSNLKLNKLMNDLTDQVFNKIRQSNG
DRVRRPMPEPFWRPYGAQQQARPQTPPGTRPQANSAPPPPPKAEPRPASGRPDGAQQQAR
PETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSTPPPPPKAE
PRPASGRPDGAQQQARPETPPRTRPQANSAPPPPPKAEPRPASGRPDGTQQQARPETPPR
TRPQANSAPPPPPKAEPSAGGERPSTARPNNTSAADASARVGDSAPAKPPVKPLYEHLGL
TDMSVDLSAVKKAYRDAAMKNHPDKNRGNEAEAAERFKVISNAYKILSDPELRKAYDNGR
INEAGNRA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacctcacccacattgcgtcttcattggcgcgggcagcgctcagcgattcgaca
aagccgaagatggagcgcgcgataaacgtcgcgagccacatcgctggcaaagtcgcgttg
caggtcaccagctcattactggagcagaaaggtctgcttaacgagcgtcagcagaaaggg
ctctcgatgattctgaaggccttgagcggcaaggagccggtgaacaatgtcgagacgcac
gaagggggaggccgattcaatctggcgcgagccgccttcgacgtggccagcgttgtctgg
gagcgcgacaagtcgatgcataacgtgatgagctttctgggcgtcagcgacagcaagggc
aagatgttgttctctctgggcaagaagctggcggatgcaatggccaagcctgagcctggc
aaggacaacagtgaggccacaaatgcgcgccatgcctatttctccagcaacttgaaactg
aacaagttgatgaacgacctcactgaccaggttttcaacaagattcgccagtcgaacggt
gatcgcgtgcgacgacccatgccagaaccattctggagaccttacggcgcccaacagcaa
gcgcgcccgcaaacgcctcccggcactcgcccacaagccaacagcgccccgccaccgccg
ccgaaagcagagccacgacctgcgtcgggccggcctgacggcgcccaacagcaggcgcgc
ccggaaacgccgcctcgtactcgaccgcaggccaatagcactccgccaccgccgccgaaa
gcagagccacgacctgcgtcgggccggcctgacggcgcccagcagcaagcacgcccggaa
acgccgccgcgcactcgcccgcaggcgaacagcacgccgccaccgccgcccaaggcagag
ccacgacctgcgtccggccggcctgacggcgcccaacagcaagcacgcccggaaacgcca
cctcgcactcgcccccaagcgaacagcgcgccgcctccgccgcccaaagcagagccacga
cctgcgtccggccggcctgacggcacccaacagcaagcacgcccggaaacgccacctcgc
actcgcccccaagcgaacagcgcgccgcctccgccgcccaaagcagaacccagcgcaggc
ggcgaacggccttcaacggcgcggcccaataacacatcggctgctgacgcatctgccagg
gtgggcgattccgcacctgccaagccgcccgtcaagccgttgtacgagcacttgggcctc
actgacatgtcggtagacttatccgccgttaaaaaggcttacagagatgccgcgatgaag
aaccaccctgataaaaaccgcggcaacgaggccgaggcggccgagcgcttcaaagtcatt
tcaaatgcgtacaagattttgtccgacccggagttgcgcaaagcatacgacaacggccgt
atcaatgaggctggtaatagggcatga
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