Pseudomonas syringae pv. tomato DC3000: PSPTO_4814
Help
Entry
PSPTO_4814 CDS
T00118
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03030
DNA replication
pst03430
Mismatch repair
pst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPTO_4814 (holA)
03430 Mismatch repair
PSPTO_4814 (holA)
03440 Homologous recombination
PSPTO_4814 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pst03032
]
PSPTO_4814 (holA)
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_4814 (holA)
Enzymes [BR:
pst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPTO_4814 (holA)
DNA replication proteins [BR:
pst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSPTO_4814 (holA)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSPTO_4814 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
AAO58243
UniProt:
Q87VX1
LinkDB
All DBs
Position
5453217..5454254
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGTLAPVYVISGDDPLLCQEAADAVRAAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVEGAHTQFVQIWPVDIGQLPQWIRQRLSQAGLSATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEEGQITVQTVQAAVADSARFDVFGLTDAVLNGEAAHALRMLEGLRGE
GVETPVILWALTRELRALANMSQQFSQGVPLDKVFSSARPPVWDKRKPLMSKALQRHSAK
RWSQLLMDAQRIDAQIKGQAAGSPWSSLSRLALLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactggctaaacacctgcaaggtacgctcgcgcctgtctat
gtgatcagtggcgacgacccgctgctttgtcaggaggctgccgatgccgtccgcgccgct
gcacgccagcagggcttcgatgaacgtcaggtgttcagcgcagacgccagcttcgactgg
ggcacgttgctccaggccggtgccagcatgtcgctgttcgccgaacgccgtcttctggaa
ctgcgcctgccttcgggcaagcccggtgacaaaggtgcagccgcgctcatggaatactgc
gccagacctgccgaagacaccctgctgctgatcagcctgcccaaactggatggcagtgcg
cagaagaccaaatggggcaaggcactggttgaaggtgcgcacacccagttcgtgcagatc
tggccggtggacatcggccagttgccacaatggattcgccaacgtttgtcgcaggcgggg
ctttcggccacacaggatgctgtcgaactgatcgcagcgcgggttgaaggtaacctgctg
gccgctgcgcaggaaatcgaaaagctcaagctaatggccgaagaaggccagatcactgtt
cagaccgtacaggctgcggtggccgacagtgcgcgtttcgatgtattcggcctgaccgac
gcagtgctcaacggcgaggcggcacatgccctgcgcatgcttgagggcctgcgcggcgag
ggggtcgagacgccggtgattctctgggcgttgactcgcgaactgcgtgcgctggccaac
atgtcccaacagttcagccagggtgtgccgctcgacaaggtgttcagctcggcccgccca
ccggtctgggacaagcgcaaaccgctgatgagcaaagccctgcaacgccactcggcaaaa
cgctggagccagttgctgatggacgcgcagcgcatcgacgcgcaaatcaagggccaggcg
gcaggctcgccttggagcagcctgagccgactggcgctactgatggcgggacagaggctg
gcgctgccagcggagtga
DBGET
integrated database retrieval system
