Pseudomonas syringae pv. tomato DC3000: PSPTO_4821
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Entry
PSPTO_4821 CDS
T00118
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00550
Peptidoglycan biosynthesis
pst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSPTO_4821
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pst01002
]
PSPTO_4821
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4821
Enzymes [BR:
pst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSPTO_4821
Peptidases and inhibitors [BR:
pst01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PSPTO_4821
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PSPTO_4821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AAO58250
UniProt:
Q87VW4
LinkDB
All DBs
Position
complement(5458494..5459654)
Genome browser
AA seq
386 aa
AA seq
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MNITTFAKRLCLLVPLIITPAAWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRL
APASLTKLMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGI
IIQSGNDASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMA
ILARAIIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSS
AVRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQ
VKAGLAEDLSMTMPKGDMKKLSASMTMNPQLVAPIAKGDVIGKVEVKKDDQVVHTANLIA
LDAVEEGGIFRRVWDSIRLFFYGLFN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccacctttgcaaaacgtttgtgcctgcttgttccactgattatcaccccg
gctgcctgggctgcggagcagatgacgcctgccgcaccgcaactggccgccaagtcctac
gtgctgatggacgctaccagcggcaacgttctggtcgagaacaacggtgatcagcgtctg
gcgcctgccagcctgaccaagctgatgactgcctacatcgcgaccctggaaatccgtcgt
ggccagatcggtgaaaacgatccggtgaccatcagtgaaaacgcctggcgcactggcggt
tcgcggatgttcatcaaggtcggtagccaggtcacggtcagcgatctgctgcacggcatt
atcatccagtcgggtaacgacgccagcgtcgcgatctctgaacacatcgccggcagcgaa
gatgcatttgccgacatgatgaacaagaccgccggcgacctgggcatgaccaacagccat
ttcatgaacccgaccggtctgccgaacccggagcactattcgtcggcgcacgacatggcg
attctggcccgagccatcatccacgaagacccggctcactatgcgatctactcgcagaaa
gagttcttctggaacggcatcaaacagcctaaccgcaacctgctgctgtggcgtgacaag
accgttgacggtctgaaaaccggtcacaccgacgaagccggctactgcatggtgtcttcg
gccgtccgtgacggcatgcgcctgattgccgtggtgttcggcaccaacagcgaacaggct
cgtgcggctgaaacccagaagctgctgacctatggtttccgtttcttcgaaacccaaaac
ttctatcagaaaggcaccgagctggctcaggcaactgtctggaaaggcaccgagcgtcag
gtcaaggccggtctggctgaagatctgagcatgaccatgcccaaaggcgacatgaaaaag
ctgtccgccagcatgaccatgaacccgcaactggttgcgccaatcgccaagggcgacgtg
atcggcaaggtcgaggtcaagaaggacgatcaggtggttcacaccgccaatctgattgcc
cttgatgcagtcgaggaaggtggcattttccgccgcgtgtgggatagcatccgcctgttc
ttctacggcttgttcaactga
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