Pseudomonas syringae pv. tomato DC3000: PSPTO_4822
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Entry
PSPTO_4822 CDS
T00118
Name
(GenBank) lipoprotein, rlpA family
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4822
Enzymes [BR:
pst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSPTO_4822
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSPTO_4822
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AAO58251
UniProt:
Q87VW3
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All DBs
Position
complement(5459896..5460924)
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AA seq
342 aa
AA seq
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MRASPILQSFKLLALTGLAVLVASCSSPSRTTSSQSPKGGAVVRTMPGLDINRAHKDGAP
WWDVDVSRIPDATPTLHTGAYKANPYTVLGKTYFPMSDSRRYVASGTASWYGTKFHGQNT
ANGEVYDLYGMSAAHKTLPLPSYVKVTNLDNNRTVILRVNDRGPFYSDRIIDLSYAAAKK
LGYAESGTARVKVEGIDPQEWWAQRGRPAPLMLNQPQVMAQATPPALSTSTGTVEQYTPP
PQQHAAPVVPLQVDAKKNASGQAAGLFLQVGAFANPDAAELLRSKLSGMVRAPVFVSSIA
RNQQTLYRVRMGPIDTPGEAQQLQNSVRSANLGQPSVVTSDQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatcgccgattcttcaatcattcaagcttctggcgttgactggcctggcagtg
ctggtcgccagttgctcgtcgccgtcacgcacaacgtcgtcgcagtcgccaaaaggcggt
gcagttgtacgcaccatgccgggcctggacatcaaccgtgctcacaaggacggcgcgccg
tggtgggacgtggatgtttcgcgcatccccgatgccacgccgaccctgcacaccggggcc
tacaaggccaacccgtacaccgtgctgggcaagacctatttccccatgagcgattccagg
cgctacgtcgcttcgggcaccgcctcctggtatggcaccaagtttcatggccagaacacc
gccaatggcgaggtttacgacctgtacggcatgagtgccgcgcacaagaccctgccgctg
cccagctacgtcaaagtgaccaacctggacaacaaccgcacggtgattctgcgggtcaac
gaccgtgggccgttttattcggaccgcatcatcgacctgtcctacgccgccgccaaaaag
ctcggttacgccgaaagcggcactgcgcgggtcaaggtcgaaggtatcgacccgcaggaa
tggtgggcgcaacgtggccgtccggcaccgctgatgctcaatcagccacaagtgatggcc
caggcaacaccgccagcgctgtccacttccaccggcaccgtcgaacaatacacaccgcca
ccccagcagcacgctgcacctgtcgtgccgttgcaggttgacgcaaaaaaaaacgcttca
ggacaagccgctgggctgtttctccaggtgggagccttcgccaacccggacgctgcggag
ctcctgaggtcgaaactgagcgggatggttcgagcgccggtgttcgtcagctcgatcgct
cgcaatcagcaaacgctctatcgggtccggatgggaccgatcgacacgccgggtgaagcc
cagcagctgcaaaacagcgtcaggtcggccaatctgggccagccgagcgtagtgacatcg
gatcagtaa
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