Pseudomonas syringae pv. tomato DC3000: PSPTO_4825
Help
Entry
PSPTO_4825 CDS
T00118
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00550
Peptidoglycan biosynthesis
pst01100
Metabolic pathways
pst01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSPTO_4825
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSPTO_4825
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4825
Enzymes [BR:
pst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSPTO_4825
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSPTO_4825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AAO58254
UniProt:
Q87VW0
LinkDB
All DBs
Position
complement(5463084..5464979)
Genome browser
AA seq
631 aa
AA seq
DB search
MSQPIRLKDHEKDARLVRGRVVFGAVAVVLLVCVLIARLYYLQVIQYDYHSTLSENNRVH
VQPIPPSRGLIYDRNGVVVADNRPSFSLSMTRERSGEWSSVLDTIVEILQLTPDDRIIFE
KRMKQGRRPFEPVPILFELSEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKSLDPINYSGTHHIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDINLQEAAEAALGGRRGAVVALDPSTGEVLAMVSAPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDSGAVTPGSRVFDPGYYQLPNY
DHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKVGIDRLAAYMNKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGVWNRPHL
ARTIEGKAPVDENPMPNIVLRDPANWGRVNHGMQEVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADNPKIVVAVMVENGESGSGVAAPVVR
QVLDAWLLDENGHLKPEYAGSLNLEAAAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccgatccgcctaaaagaccacgaaaaagacgcacgtctggtgcgcggcagg
gtcgtgttcggtgctgtggcggtcgtgttgctggtgtgcgtactgattgcccgtctgtat
tacctgcaggtcatccagtacgactatcactccacgctgtcggaaaacaatcgtgttcac
gttcagcccattccgcccagccgtggcctgatctacgaccgcaacggcgttgtggtggcg
gataaccggcccagtttcagcctcagcatgacccgcgagcgttccggcgaatggtccagc
gtgctcgacaccatcgtcgagatcctgcagctcacccctgacgaccggatcattttcgaa
aaacgcatgaagcaggggcgtcggcctttcgagccggtgccgatcctgttcgagttgagc
gaagagcaaatcgccctgatcgccgtcaaccagttccgcctgccgggcgtcgaagtggtg
gcgcaactggtacgccactacccgcaagggccgcattttgcgcactcggtgggctacatg
gggcggatcaacgaaaaagagctcaagagcctcgacccgatcaattacagcggtacgcac
catatcggcaagaccggtatcgaacgcttctacgaagccgaactgcatggtcaggtcggc
tacgaagaggtcgaaaccaacgctcgtggccgcgtgctgcgcgtgcttaaacgcactgac
ccgatccccggcaaggacatcgtcctgagcctggacatcaatcttcaggaagccgccgaa
gcggcgctgggcgggcgtcgtggtgcggtggttgcgctggacccttctaccggtgaagtg
ctggcgatggtcagtgcgcccagctttgatccgaacctgttcgtgaccggtatcagcttc
aaggcctacgcagagctgcgcgattccatcgaccggccactgttcaaccgcattctgcgc
ggcctttacccacccggttcgaccatcaagcctgccgtggcgattgcagggctggactcc
ggcgctgtgacgcctggctcgagggtcttcgatcctgggtattaccaactgcccaattac
gatcacaagtaccgcaactggaaccgcaccggcgacggctgggtggacctggatacggcg
atcatgcgttcaaatgacacgtacttctacgatctggcacacaaagtgggcattgatcga
cttgccgcctacatgaacaagtttggtatcgggcagaaggtgtcgctggacatgttcgaa
gagtctcccggcctgatgccgtcccgtgaatggaagcgcgccacgcgccgtcaggcctgg
ttcccgggcgaaaccctgattctcgggatcggtcagggctacatgcaggcaaccccgttg
caactggcccaggcgaccgcgctggtggccaacaagggtgtctggaaccgtccgcatctg
gccaggaccatcgagggcaaagcgccggtggacgaaaacccgatgccgaacatcgtgctg
cgtgatccggccaactggggacgggtcaaccacggcatgcaggaagtgatgcacggcgcc
cgcggcacggcgcgcaaggctgccatcggtgcgcaataccggattgccggcaagagcggt
acggcgcaggtcgttgcgatcaagcaaggcgagaaatacgaccgcaccaaggtgcaggaa
cgtcaccgtgaccacgctttgttcgtcggttttgcgccggccgacaacccgaaaatcgtt
gtggcagtcatggtcgagaacggcgagtccggctccggcgtggctgcacctgtagttcgt
caggtcctggacgcctggctgctcgacgaaaacggccatctcaagcctgagtacgccggt
tccctgaatctggaggctgcggcccgtgaagagtaa
DBGET
integrated database retrieval system
