Pseudomonas syringae pv. tomato DC3000: PSPTO_4842
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Entry
PSPTO_4842 CDS
T00118
Symbol
speA
Name
(GenBank) biosynthetic arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00330
Arginine and proline metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PSPTO_4842 (speA)
Enzymes [BR:
pst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PSPTO_4842 (speA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AAO58271
UniProt:
Q87VU3
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All DBs
Position
5481297..5483210
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AA seq
637 aa
AA seq
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MSVRRTRKDDGSQWTVADSRSVYGIRHWGAGYFAINEAGRVEVRPNGPDSSPIDLYEQVD
NLRKSGLSLPLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVEN
IIATQNVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVI
EKESEVELVIEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERF
RKAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDY
DGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVT
DVEKHNDEVPKIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIATQYADGKI
SLAEKALGEQCYFAVCRRLYNSLKARQRSHRQVLDELNDKLADKYICNFSVFQSLPDTWA
IGQVLPILPLHRLDEEPVRRAVLQDLTCDSDGKIKQYVDEQSIETSMPVHSLNEGEDYLL
GIFLVGAYQEILGDMHNLFGDTDSVNIYQNPDGSVYHAGIETHDTIEDMLRYVHLSPEEL
MTHYRDKVASAKITPRERTYFLDALRLGLTRSSYLSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgacgcacacgcaaagacgatggcagccaatggacagttgcggacagccgc
agcgtttatggcattcgccattggggcgcgggttattttgcaatcaacgaggcgggccgc
gttgaagttcgccccaacgggccggacagctcgcccatcgatctctatgagcaagtcgac
aacctgcgcaaaagtggcctgtcgctgccgttgctggtgcgcttccccgatattctgcag
gaccgcgtgcgtcaactgaccggcgcattcgacagcaacatcgcgcgcctggaataccag
agccaatacaccgcgctgtacccgatcaaggtcaaccagcaggaagcggtggtggaaaac
atcatcgccacgcagaacgtctcgattggtctggaagccggctccaagcctgaactgatg
gccgtgctggccctggcgcccaaaggcggcaccatcgtctgcaacggttacaaggaccgc
gagttcatccggctggcgctgatgggccagaagctgggccacaacgtgttcatcgtcatc
gagaaagaatccgaagtcgaactggtcatcgaagaagccgccgagcttaaagtcgcccct
caggttggcctgcgcgtgcgcctgtcgtcccttgcgtcgagcaagtgggcagacacgggc
ggcgagaaatccaagttcggtctgtctgccgcgcaattgctctcagtggtcgagcgcttc
cgcaaggcaggcctcgatcagggcatccgcctgctgcactttcacatgggctcgcagatc
gccaacctggcggactaccagcacggcttcaaggaagcgatccgctactacggcgaactg
cgcaaactcggcctgccggtggactacatcgacgtcggcggcggtctgggcgtcgattac
gacggcactcactcgcgcaatgccagctcgatcaactacgacatggacgattacgccggt
gtcgtggtcggcatgctcaaggaattctgcgacgcgcagagcctgccgcacccgcacatt
ttctcggaaagcggccgctcgctgaccgcccaccacgccatgctggtggtgcaggttacc
gacgtcgagaagcataacgacgaagtgccgaagattgccgacaaggaaagcctgccggag
accgtgcagtggctggttgacctgctggggccgaccgacatcgagatggtcaccgaaacc
tactggcgcgccacgcactacatgagcgacatcgccacccagtacgccgatggcaagatc
agcctggccgagaaggcgctgggcgaacaatgctacttcgctgtctgccgccgtttgtac
aattcgctgaaagcccgtcaacgctcgcatcgtcaggtgctggacgagctcaatgacaag
ctggccgacaagtacatctgcaacttctcggtgttccagagcctgccggacacctgggca
atcggccaggtgttgccgatcctgccgttgcatcgcctcgacgaggagccggtacgccgc
gccgtgctgcaagacctgacctgcgattccgacggcaagatcaagcaatacgtcgacgag
cagagcatcgagaccagcatgccggtgcattcgctgaacgaaggcgaagactatctgctg
ggcatctttctggtgggcgcttatcaggaaattctgggcgacatgcacaatctgttcggt
gacaccgactcggtgaacatctaccagaacccggacggcagcgtgtaccacgccggtatc
gagacccacgacaccatcgaagacatgctgcgctacgtgcatttgtcgccggaagaactg
atgacccattatcgggacaaggtcgccagcgccaagatcaccccacgcgaacgcacctac
ttcctcgacgccctgcgcctaggcctgacccgctcgtcgtacttgtcgtcctga
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