Pseudomonas syringae pv. tomato DC3000: PSPTO_4976
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Entry
PSPTO_4976 CDS
T00118
Symbol
thiC
Name
(GenBank) thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00730
Thiamine metabolism
pst01100
Metabolic pathways
pst01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PSPTO_4976 (thiC)
Enzymes [BR:
pst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PSPTO_4976 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAO58404
UniProt:
Q87VG1
LinkDB
All DBs
Position
complement(5646584..5648473)
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AA seq
629 aa
AA seq
DB search
MSTKPKNAAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREVTLDVTPTDFGGEI
NAPVTVYDTSGPYTDPNVIIDVRKGLADVRSPWIDSRNDTERLPGLSSHFGQQRLSDAEL
TALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHA
GHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKH
DLQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVARGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaccaaaaaacgcagcccatttgagcgagtcggcacaagtcgattccgga
tcggtacagccgtttacccgttcgcagaaaatctacgttcagggctcacgcccggacatc
cgcgtgccgatgcgcgaagtgactctggatgtcacgccgacggactttggcggcgagatc
aacgcgccggttaccgtttatgacacgtcaggcccgtacaccgaccccaacgtgatcatc
gatgtgcgcaaaggcctggcggatgttcgctcgccgtggatcgactcgcgcaatgacacc
gagcgcctgccgggcttgagttcccacttcggccagcagcgcctgagtgacgccgaactg
accgcgctgcgctttgcccatgtgcgcaatccgcgtcgcgccaaggcgggcgccaacgtc
agtcagatgcactatgcgcgtcaggggatcatcactgccgagatggaatacgttgccatc
cgcgagaacatgaaacttcaggaagcccgcgccgcaggcctgctgacccagcagcacgcc
gggcacagcttcggggcgagcattccgaaggagatcaccgccgagttcgtgcgcgaggaa
atcgcccggggtcgagccatcattccggccaacatcaaccatgtcgagctggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaacatcggcaacagtgcgctgggt
tcttccatcgaagaagaagtcgccaaactgacctggggcattcgctggggttcggacacg
gtcatggacctgtccaccggcaagcacattcacgaaacccgcgaatggatcatccgtaac
tcgccggtgccgatcggtacggtgccgatctatcaggcgctggaaaaagtcggcggcgcg
gccgaggatctgacctgggagctgttccgcgacacgttgatcgaacaggccgagcagggc
gtcgattacttcaccattcacgccggtgtgctgctgcgttacgtaccgctgaccgccaag
cgcgtgaccgggattgtcagccgtggtggttcgatcatggccaagtggtgcctggcgcat
caccaggaaaacttcctgtacacccatttcgaagacatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggcgatggcttgcgccccggctcgattgccgacgccaacgat
gcggcgcagttcggtgagctggaaaccctcggcgaactgaccaagattgcctggaaacac
gacttgcagaccatgatcgaaggcccaggccacgtgccgatgcagttgatcaaagagaac
atggacaagcagctggagtgctgcgacgaagcgccgttctacaccctcggcccgctgacc
actgatattgcaccgggttatgaccacatcacctcgggcatcggcgcggcgatgatcggc
tggttcggttgcgccatgctgtgttatgtcacacccaaggaacacctgggtttgccgaac
aaggatgacgtgaagaccggcatcatcacctacaagatcgcggcccacgcagcggacctg
gccaaagggcatcctggcgcgcagattcgcgacaacgcgctgagcaaggcgcgtttcgag
ttccgctgggaagaccagttcaacctcggcctggacccggacactgcgcgttcataccac
gatgaaaccctgcccaaggactcggccaaggtcgcgcatttctgctccatgtgcgggccg
aaattctgctcgatgaaaatcacccaggaagtacgtgaatacgccgccaatcagcgcatt
gaagcagtggatgtcgacgtcgccaggggccttgccgaacaggccgagcgcttcaagcag
gaaggcagccagttgtacaagaaggtgtag
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