Pseudomonas syringae pv. tomato DC3000: PSPTO_5001
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Entry
PSPTO_5001 CDS
T00118
Symbol
waaG
Name
(GenBank) lipopolysaccharide core biosynthesis protein WaaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00540
Lipopolysaccharide biosynthesis
pst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PSPTO_5001 (waaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pst01005
]
PSPTO_5001 (waaG)
Lipopolysaccharide biosynthesis proteins [BR:
pst01005
]
Core region
PSPTO_5001 (waaG)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AAO58429
UniProt:
Q87VD8
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Position
complement(5680000..5681121)
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AA seq
373 aa
AA seq
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MQLAFVLYKYFPFGGLQRDFMRIALECQQRGHQIRVYTLIWEGDVPPGFEVLVAPVKAFF
NHRRNEKLTAWMEADLAVRPVDRLIGFNKMPGLDVYYAADGCFEDKAQNLRSPLYRKWGR
YRHFADYERAVFARDSKTQVLMISEVQQPLFIKHYDTPLSRFHLLPPGISQDRRAPPDAA
AIRADFRKEFGLADDDRLLVQIGSGFKTKGVDRSLKALAALPANMKKHTRLFVIGQDDPK
VFQLQSAALGLGDQVTFMKGRSDIPRFLLGADLLIHPAYNENTGTVLLEALVAGLPVLVS
AVCGYAHYIAEADCGRVLDEPFDQVQLNRYLTDMLQDDAARGAWSRNGLAFADTADLYSM
PQHAADVILAEHY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggcttttgtactctacaaatactttccatttggcggcctgcaacgcgatttc
atgcgcattgcgctggaatgtcagcagcgcggccatcaaattcgcgtttacacgctgatc
tgggaaggcgacgtgccgcccggttttgaagtgctggtggctccggtcaaggcgttcttc
aatcaccggcgcaacgaaaagctcactgcgtggatggaagcggacctggctgtacgcccg
gtggaccgtctgatcggtttcaacaagatgccagggctggacgtgtattacgccgctgac
ggttgtttcgaggacaaggcgcaaaacctgcgcagcccgctgtatcgcaagtggggacgg
tatcgccatttcgccgattacgagcgcgccgtgttcgccagggactcgaaaacccaggtc
ttgatgatctccgaagtgcagcaaccgctgttcatcaaacattacgacaccccgttgtcg
cgcttccacctgctgccaccgggcatttcccaggaccgtcgcgcaccgccagacgctgcc
gccattcgcgccgactttcgcaaggagttcggccttgccgacgatgaccggttattggtg
caaatcggctccggtttcaagaccaagggcgtagatcgcagcctgaaagcacttgcggct
ttgccggcaaacatgaagaaacacactcgcttgtttgtaatcggccaggacgaccccaaa
gtattccagttgcagagcgctgcgctggggttgggcgatcaggtgacgttcatgaaaggg
cgcagcgatattccgcgcttcctgctcggtgccgacttgctgatccacccggcctacaac
gaaaacaccggcacggtattgctcgaagcactggtggccgggctgccggtactggtcagc
gcagtgtgtggttacgcccattatattgccgaggccgattgcgggcgggttctggatgag
ccgttcgatcaggtgcagctcaatcgctatttgaccgacatgcttcaggatgatgctgca
cgcggcgcctggagtcgcaacggtctggcctttgctgacacagcagacctttacagcatg
ccgcaacacgctgcggatgtgattctggcggagcactattga
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