Pseudomonas syringae pv. tomato DC3000: PSPTO_5030
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Entry
PSPTO_5030 CDS
T00118
Name
(GenBank) sensor histidine kinase/response regulator
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02020
Two-component system
pst02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSPTO_5030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSPTO_5030
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pst01001
]
PSPTO_5030
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pst02022
]
PSPTO_5030
02035 Bacterial motility proteins [BR:
pst02035
]
PSPTO_5030
Protein kinases [BR:
pst01001
]
Histidine kinases
CheA family [OT]
PSPTO_5030
Two-component system [BR:
pst02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
PSPTO_5030
Bacterial motility proteins [BR:
pst02035
]
Pilus system
Twitching motility proteins
PSPTO_5030
Chemosensory pili system proteins
PSPTO_5030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
TetR_C_25
Motif
Other DBs
NCBI-ProteinID:
AAO58458
UniProt:
Q87VA9
LinkDB
All DBs
Position
complement(5727198..5733161)
Genome browser
AA seq
1987 aa
AA seq
DB search
MADRHDYVALEWLKGEIAETLRQARHALDEFIEDPANGAAMAECLNLVHQVHGSLQMIEF
YGAALLAEEIEQLALAVQQNRVSHPVESEQLLIQAMSQLPLYLERIHSARRDLPLVVLPL
LNDLRSARGESLLSETSLFAPQLVVVPALDEEELARRNTPELPGLLRKLRQTLQAALAGL
MREQGVQTQLGYMAKVFARLEQLCEDAPLGPLWRISSALVETMLNGNFTNSPALRSLLKD
ADKELKRLAEQGVAGINQPAPEELLKSLLFYIAKSDSLAPKMLDLKDQYALADALPGNDV
VNEERARMAGPDRDAMRSVIVALCEGLVRVKERLDVFVRGDRQHVSELNALLPPLRQIAD
TLAVLGFGQPRKVIIDQLSVVLGLAQGQREPSDGALMDVAGALLYVESTLAGMAGNNEQS
SREESRLPTTDLTQIHQLVIREARNVLQQAKDVILDYIDGEWDRQRLDPLCALIVQVRGA
LAMIPLARAASLLAACNEYIQEHLLVDETRPTGVQLDCLADTITGIEYYLERMLEDHEAP
GDQVLDMAQQSLARLGYTPAADTLEVPLLDEIITQDELLELDDRKALVSPTQTIAQVLAS
PMSAVNPPARNVPTSLLPPSPDEEAVDEELREVFLEEADEVLDALREYLPRWFASLGSGG
HWDSTALTEVRRAFHTLKGSGRMVRALILSELAWSVENLLNRVLEGDVLPGLEVQQLMGE
VLALLPSVIRDFADDAQCQRNDVDLLAARAHALANGLEAPSLSVADSHAPGEVLDPQLLE
IFRQEALGHLNTLSRFLDNAEQSASPSISDAVLRALHTLKGSAHMAGVLPIAELASPLDQ
LVREYKANLIDIGAPELDVLRRAEPLLRMGLEQLDTTPLGEIAGAAQLIDAAFSLLNERL
TAVLRDSDSGLRIKRNPTLLAGFLAEGMDIVLDAENLLRRWRQHPGERQELSALLDELTT
LGHGAHLADLPQVDELCEALLDLYGAVEESSLAVSERFFDVAEQAHEALINMLDQVAAGQ
NVEPRPECVRALNDLLDQALDPSATGLVKSDGHRTLSVTELNAATEQLAREAVPPEVFSP
DDEIVEIFLEEAVDILDSAGQALQRWLADPENPAPLSSLQRDLHTLKGGARMAEVVEVGD
LAHELENLYEGLIDRRFNHSPTLAELLHKSHDHLAILLEQLYQHAALSDPSALIEALRGC
RTVESAVPEAPLSSQASADLPEHDTELREVFLEEGFDIIESSGAALARWQADPHNLLEVE
NLLRDLHTLKGGARMVEIAPIGDLAHELETLYEGLCAGSMQADPLMISLLQSGHDVLADM
LDAVRSEKPLSDATLLIENIRRLASDGPTGGQFVAQAIESGPEPVVAVTPVVDGEGERSG
PEMVKVPAEQLEGLVNLAGETSIFRGRIEQQIIDSQVTLVEMETTIERMRDQLRRLDMET
QGRILSREQVQAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLMDLKETLGARARDAE
TLLSQQARVNTQLQEGLMRTRMVPFERLVPRLRRVVRQVASELNKKVHFEVGNADGEMDR
NVLERMVAPLEHMLRNAVDHGLESTEKRIAAGKPEQGRINLELMYEGGDMLIELSDDGSG
VDLAAVRRKAIKRGMIHPDADLADHEVLPFILQAGFSTSEIITQISGRGVGMDVVHAEVK
QLGGSMVIDSVPGKGTRFRIRLPISVSVNRALMVTCGEEQYAVPLNTVDGIVRVMANELD
GYYQTSPPRYQYGGRSYELRYLGELLGNSPPRLVGQLQPLPVLLVHLQDQWVAVQVDALA
GSREIVVKSLGAQFSRVQGISGATILGDGRVVLILDLMAQLRTLQGLPFRGFTPAAYNEI
EHARPLLVMVVDDSVTVRKVTSRLLERHGMHVLTAKDGIDAMSLLQEHTPDIMLLDIEMP
RMDGFEVASQIRQDEQLKELPIIMITSRSGQKHRDRAMALGVNEYLSKPYQENVLLESIT
YWSQVDV
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgtcacgattacgtggcccttgaatggctcaagggcgagatcgccgaaacg
ctgcggcaggcccgccatgcgctggacgaattcatcgaagatccggccaacggcgcggcg
atggccgagtgcctgaacctggtgcatcaggttcacggcagcctgcaaatgatcgaattc
tatggcgcggcgttactggccgaggaaatcgagcaactggcgctggcagttcagcaaaat
cgcgtcagccatccggtcgagtccgagcagcttttgattcaggccatgagccagttgccg
ctgtacctggagcgtattcactccgcgcgccgtgatctgccgctggtggttttgccgttg
ctcaatgacctgcgcagtgcgcggggtgaaagcctgctctcggaaaccagcctgttcgcc
ccgcaactggtcgtcgtcccagcccttgatgaggaagaactggcgcgacgcaataccccg
gaactgccaggcctgctgcgcaagctgcgccagaccttgcaggcagcgctggcgggcctg
atgcgcgagcagggcgtacagacccagctcggttacatggccaaggtcttcgcccggctc
gagcaattgtgcgaagacgcgccgctcggtccgctctggcgaatttcctcggcgctggtc
gagaccatgctcaacggcaacttcaccaatagcccggccctgcgcagcctgttgaaagac
gctgacaaggaactcaagcggctggccgagcagggcgtggcgggcatcaatcagcctgcg
ccggaagaattgctgaaaagcctgctgttctacatcgccaagtccgacagcctggcgccg
aaaatgcttgatctcaaagatcagtacgcactggccgacgccttgcccggcaacgacgtg
gtcaatgaagagcgggcgcgcatggccgggccggaccgcgatgccatgcgctcggtgatc
gtggcgttgtgcgaagggctggtgcgggtcaaggaacggctcgatgtgtttgtgcgcggt
gaccgccagcatgtcagcgagctcaacgccttgctgccgccgctgcgacagatcgccgac
accttggcggtgttgggctttggccagccgcgcaaggtgatcatcgaccagctttcggtt
gttctggggctggcgcaggggcagcgcgagcccagcgacggcgcgctgatggatgtggcg
ggcgcgttgttgtacgtcgaatcgaccctcgcagggatggccggtaataacgaacagtcg
agccgcgaagaaagccgcctgccgaccaccgacctgacgcagattcatcaactggtgatt
cgcgaggcccgtaacgtcttgcagcaagccaaggacgtgatcctcgactacatcgatggc
gaatgggaccgccagcggcttgacccgctgtgcgcgctgatcgtacaggttcgcggtgcc
ctggcgatgatcccgctggcgcgtgcggcgagcctgctggctgcctgtaacgaatacatt
caggaacacctgctggtggatgaaacccgacccaccggcgtgcagctcgactgtctggcc
gacaccattaccgggatcgagtactacctggagcgcatgctcgaagaccacgaagcgcct
ggcgatcaagttctcgacatggcccagcaaagcctcgcgcgtctgggttatacccccgca
gcggatacgcttgaagtgccgctgctcgacgagatcatcactcaggacgaactgctggaa
ctggacgaccgcaaggccttggtcagcccgacgcaaaccattgcacaagtgctcgccagc
ccgatgtcggcggtcaaccctccggcgcgcaacgtgcccaccagcctgctgccgccttcg
cctgacgaagaggcggtggatgaggagctgcgcgaagtttttctggaagaggccgacgaa
gtcctcgacgcgctgcgtgagtatctgccgcgctggtttgcctcgctcggcagcggcggt
cactgggacagcacggcactgaccgaggtgcgccgggcgtttcataccctcaagggcagc
ggccgtatggtgcgcgcgctgatcctcagtgaactggcttggtcggtggaaaacctgctc
aaccgggtgctggaaggcgacgtacttccgggtttggaagtgcagcaactgatgggtgaa
gtgttggcgctgctgccctcggtgatacgcgacttcgctgatgacgcgcagtgccagcgc
aacgacgtcgacctgctggcggcccgcgcccacgcgctggccaatggtcttgaagcacct
tctttgtctgttgccgactcgcatgcgccaggcgaagtgctggatccgcagttgctggaa
attttccgccaggaagcgctggggcatttgaataccctcagccgctttctcgacaacgcc
gaacagtccgcatcgccttcgatcagcgacgcggtgctgcgcgcactgcacacgctcaaa
ggcagcgcgcacatggctggtgtgctgccgattgccgaactggccagcccgctcgaccag
ttggtgcgagaatacaaagccaacctgatcgacatcggcgcgcccgaactcgacgtgctg
cgccgcgccgaaccgctgctgcgtatggggctggagcagctggacacgactccgctgggc
gagattgcgggtgcggcgcagttgatcgatgctgccttttcgctgctcaatgagcgcctc
acggcggtgctgcgtgactcggacagcggcttgcggatcaagcgtaaccccacgctgctg
gcgggctttctggccgaaggcatggacatcgtgctcgatgccgaaaacctgttgcggcgc
tggcgtcagcatcccggtgagcgacaggagcttagcgcgctgctcgatgagctgaccacg
ctggggcatggcgcgcacctggccgatttgccgcaggtcgatgagctgtgcgaggccttg
ctcgacttgtatggcgctgtcgaagaaagcagcctggcggtcagcgagcgctttttcgac
gtagccgaacaggcccatgaagccttgatcaatatgcttgatcaggttgcggccggccag
aatgtcgagccacgccccgagtgcgtgcgcgccttgaacgatctgctggatcaggcgctg
gacccgtcggcgaccgggctggtcaagagcgatggccaccgtaccctgagtgttacagaa
ctcaatgcggccaccgagcaactggcccgtgaggccgtgccgccggaggttttcagtccg
gacgacgagattgtcgagatatttctggaggaagccgtcgatatcctcgacagcgcaggg
caagccctgcaacgctggctggctgatccggaaaacccggcaccgttgagttcgctgcaa
cgcgacctgcacaccctcaagggcggtgcgcggatggccgaagtggttgaagtgggcgac
cttgcccacgagctggaaaacctttacgaaggcttgatcgaccgacgcttcaaccactca
ccgacgctggccgagttgctgcacaagagtcacgaccacctggcgattctgctggagcag
ttgtatcagcacgcagcgctcagcgatccctcggcgctgatcgaggcgttgcgcggctgc
cgcacggtcgagagcgcagtgcccgaagcgccattatcgtcccaggccagcgcagacctg
cctgagcatgacaccgagttgcgtgaagtcttccttgaggaaggtttcgacatcatcgaa
agctccggcgcggcactggcccgctggcaggctgacccgcacaacctgctggaggtcgag
aacctgctgcgtgacctgcacaccctcaagggtggcgcacggatggtcgaaattgctccg
ataggcgaccttgctcacgagctggaaacgctttacgaagggctttgcgcgggcagcatg
caggctgatcctctgatgatcagcctgttgcaaagcggccacgatgtgctggccgacatg
ctcgatgcggtgcgctctgaaaagccgctgtctgacgcaaccctgctgatcgaaaacatc
cgccggctggccagcgatggcccgacgggtgggcagtttgttgcgcaggccatcgagtcc
ggcccggaaccggttgtggcggtcacgcctgttgttgacggcgagggcgagcgcagtggc
ccggaaatggtcaaggtgcctgccgagcaactggaaggcctggtcaatctggcgggcgaa
acatccatcttccgggggcgcattgagcagcagattatcgattcgcaggtcacgctggta
gaaatggaaaccaccatcgagcggatgcgcgaccagttgcgtcgtctggatatggaaacc
caggggcgcattctcagccgtgagcaggttcaggccgagcggttgggttacgaagagttc
gacccgctggaaatggaccgccactctcagttgcagcagttgtcgcgcgccttgttcgag
tctgcgtccgacctgatggacctcaaggaaacccttggcgcgcgagcccgcgatgccgaa
acactgctgtcgcaacaggcccgggtcaacacccagttgcaggaaggcctgatgcgcacg
cgcatggtgccgttcgagcgactggtgccgcgtttgcgtcgcgtggtgcgacaggtggcc
tcggaactgaacaagaaagtgcatttcgaggtcggcaatgccgatggcgagatggaccgc
aacgtgctggagcggatggtcgcgccactggagcacatgctgcgcaacgccgtcgatcac
ggccttgaaagcaccgaaaaacgtatcgctgctggcaaaccggaacagggtcgcatcaac
ctggagctgatgtacgaaggcggcgacatgctgatcgagctgagcgatgacggctcgggc
gtcgatctggcggccgtgcgccgcaaggccatcaagcgcggcatgatccacccggacgcc
gacctggccgatcatgaagtgttgccgttcattctgcaggcggggttttccaccagcgag
atcatcacccagatttccgggcgaggcgtgggcatggacgtggtgcatgccgaggtcaag
cagttgggcggctcgatggtcatcgactcggtgcctggcaagggcacgcgctttcgtatt
cgtctgccgatttcggtgtcggtcaaccgggcgctgatggtgacctgtggcgaagagcaa
tacgcagtgccgctcaacaccgtcgatggcatcgtgcgcgtcatggccaacgagctggac
ggttactaccagaccagcccgccgcgttatcagtacggcgggcgcagttacgagttgcgt
tatctgggtgagttgctgggcaacagcccgccacggttggtcgggcaattgcagccgttg
ccggtattgctggtgcatttgcaggatcagtgggtggcggtgcaggtcgatgcgctggcc
ggctcgcgggaaattgtggtcaagagccttggcgcgcagttttccagagtgcagggcatt
tccggcgcgaccattctgggtgatggccgtgtggttctgattcttgatctgatggcgcag
cttcgcaccttgcagggcctgcctttcagaggcttcacgccagcagcgtataacgagatc
gagcacgccaggccattgctggtgatggtggtggacgattcggtgacggtgcgtaaagtg
accagtcggttgcttgaacgccacggcatgcatgtgctgaccgccaaggacgggatcgac
gccatgagcctgttgcaggagcacacgccggacatcatgttgctggatatcgaaatgccg
cgcatggacggctttgaagtggccagccagatccgccaggacgaacagctcaaggaactg
ccgatcatcatgatcacctcacgctccggccagaaacaccgcgaccgggccatggcgctg
ggcgtcaacgagtacctgagcaagccttatcaggagaacgtgctgctggaaagcatcact
tactggagtcaggtcgatgtctga
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integrated database retrieval system
