Pseudomonas syringae pv. tomato DC3000: PSPTO_5232
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Entry
PSPTO_5232 CDS
T00118
Name
(GenBank) pyocin/colicin protein, putative
Organism
pst
Pseudomonas syringae pv. tomato DC3000
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Motif
Pfam:
Col-Pyo_DNase
Pyocin_S
HNH
Sap1_N
Motif
Other DBs
NCBI-ProteinID:
AAO58658
UniProt:
Q87UR4
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Position
5952403..5954370
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AA seq
655 aa
AA seq
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MADEQEKHIYVKYWPIPDLGSADRAAAEAAANKASGGGNSGWSIGIGGGGGGPSTTGLGP
GRGRRRGITNKQLRRLLRQQEAEAHALAQRQAAEHAAHLARVEAEAHARAMAEAAERERV
ETQVRAQAEKDQAHRQALETLTASYPSLQSGLAQNYLLASASLPNDLQKEIASGHDLNAD
PPRDEQTLELILQKKTRVNYLLAIKQPLLDERRAQALSLTGQELDHATQKDHLNYLVYYS
QGDPPRVQQAHEAWVNALSQTYEAKLLAESVTLLNEQSAALSMRHAELSLANKPASQEAR
QAAGIDKLWSVIAPASTTTAAPGIRTVATNIAKDQLIRIATRTLGSNLVTLLAMYPQPLG
DAELPPAVIATPLSQLNLPPHIDLHYLASVKGTLDVPHRLTSDEAGTSATRWVATDGVKV
GTKVRVRTFTYNAQNNSYEFIRDGESTPALIWTPIAQPADSSTSSPAGPPALPVDPGNVV
TPFVPELEAYPAIDRDDPDDYILISPIDSGLPNTYLLFKDPRSIPGVASGYGEPVTGVWL
GDRTRAEGASIPTHIADQLRGRRFGDFASLRKATWIAVADDPELGKQSTQNNLEIMRGGG
APHPKLSDQAGGRTRFEIHHKNYISKGGAVYDIDNLVIMTSRQHIDHHRSQKNDL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagcaagaaaaacatatatatgtaaaatactggcctattccagacttaggg
tccgcagaccgggcagcggccgaggcagctgctaataaagcgagtggtggaggtaattca
ggctggagcattggaatcggtggtggcggcggcggacccagcactaccggcctaggccca
gggcgcggtcgccgaagaggtatcactaataaacagctgagacgtctattaaggcaacaa
gaggcagaggcgcatgcgttggcccagcggcaagcggcagaacacgcggctcatctcgca
cgagtagaagctgaggcgcatgctcgggcaatggcggaagccgccgagcgagagcgcgtt
gaaacgcaggtacgcgcacaggccgaaaaagatcaggcacatcgacaggctcttgaaaca
ctgacagcgtcctatccctcgttacaatctggattggcacaaaactacttactggcttct
gcatcgctgccaaatgatcttcaaaaagaaatagcgtcaggtcatgatctaaatgctgat
cccccacgcgacgagcagactcttgagctgatacttcagaaaaaaaccagggttaactat
ttacttgcaatcaaacaaccgttactggacgagcgtcgcgctcaggctctgagtctcacc
ggtcaagagcttgaccatgctacacaaaaagaccacctgaactatctggtgtactacagc
cagggtgatcctccacgtgtgcagcaggcccatgaagcgtgggtaaacgctttatctcaa
acctacgaagcaaagcttcttgccgagtcggtcacgctgctcaatgaacaatcagcagcg
ctttccatgcgccatgctgaactgtcgctggccaataaaccggcgagtcaggaagcacga
caggccgctggcatcgacaagttgtggtcagttattgcccccgcgtcaaccaccaccgca
gcaccaggcatcagaaccgttgcgaccaacatcgcgaaggatcaactcatcaggattgcg
accagaacattgggcagcaatctggttacgttgctggcgatgtatccacaaccgttgggc
gacgcagaactgccgcccgccgttatcgccacacctctgtcgcagctcaacctgccgccg
catatcgatctgcactaccttgccagcgtcaaaggcacgctggatgtgcctcatcgactg
acatccgatgaagctggcacaagcgctacacgctgggtagctacggacggtgtgaaagtt
ggtaccaaggttcgcgtaagaactttcacctataacgcacagaacaattcctacgagttt
atccgtgacggggaatcgacaccggcactgatatggacgccaatagcacaaccagcggac
agttcgacaagctcacccgcagggccacccgctttgccggtagatccaggcaacgtggtg
acaccttttgtacccgagcttgaagcttacccggcgattgatcgagatgatcctgatgat
tacattctcatatcgccgattgattcagggctgcctaacacttacctgttgttcaaggac
ccgaggtcgattccgggggttgcgagtgggtatggtgagccggtgactggagtttggcta
ggggacagaacgcgtgcagaaggcgcatcgattccgacgcatattgcagatcaactgcgc
ggacgacgatttggtgattttgcttcactgaggaaagcaacctggatagccgtagccgat
gatcccgagctagggaaacagtctactcagaataaccttgaaataatgcgaggtggtggt
gcgccccaccctaaactcagcgaccaagccggaggccgtacgagatttgaaatccatcat
aaaaattatatttcaaaaggcggcgcggtttatgacatcgacaacttggttattatgaca
tcaaggcaacatattgatcatcacaggagccaaaaaaatgatctttaa
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